NONHSAT007232
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT007232 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1109 nt |
Genomic location |
chr1+:162579813..162580921 |
Exon number |
1 |
Exons |
162579813..162580921 |
Genome context |
|
Sequence |
000001 catgacacta gggatagaag gaatagatgt gataaacaaa ggtcatgttt gcaaacctac attttactat cacacttaat 000080
000081 ggtaaaagac ttgtgtattt cccccccaaa atcaggaaca aggcagtatg ttcttttttg ctacctctat tcaatgttgt 000160 000161 atagaagtta tacccagtaa aataaggcaa gaaaaacata taggtatcta cattggaaag gaataaataa atctgtctat 000240 000241 ttgaagatga catgattatc taccttgaaa atcctgtggg atctgcatgc aagttatcag agctaataag tttaacaagg 000320 000321 ttgtgggata caagatcaac atacaaaaat catttgtatt tctatattct agcaacaaat aattagacat taaaatttag 000400 000401 aaaatcaaca tcatttatag taatgttaaa acatgaaatg cttatgggta aatctgacta atatgtgaag gacctgtaca 000480 000481 ttgaaaagta caaaatgttg ttgagtaaaa ttacagaagt agatgagaag atttggtgtt aagatgtcag ttctccccaa 000560 000561 aatgatctat agatgacaag gtagacaaat atatcaatga gacagaatag ataatcgata aatagactaa tctagaaata 000640 000641 gacaatacat atattgtcaa tttgagtccg ggcgtggtgg ctcacgccta taatctcaag attttgggaa gctgaggtag 000720 000721 gaggatcact tgaagccggg aattcaagat cagcctggtc aacatagtga gaccccccat ctcagaaaag aaaaagaaag 000800 000801 gaaagaaagg aagaaggaag gaaggaaaag agggaggaag ggagggaaag gaaggaaagg aagaaataag tatattgtca 000880 000881 attcattttc aactaaggtg cagagacatt tcaatggaga aaaatagtat tttcaacaaa cggtgctgaa acaattagat 000960 000961 atccatcttc aagaaagtaa acttatacat accttgcacc aaatataaaa agtaatttga aataaagcat agacctaaat 001040 001041 gtaaaaccta aaactatata aaacttctag aagaggctgg gcgtggtggc tcatgcctgt aatcccagc |
Predicted Small Protein
Name | NONHSAT007232_smProtein_251:385 |
Length | 45 |
Molecular weight | 5166.9235 |
Aromaticity | 0.136363636364 |
Instability index | 44.3229545455 |
Isoelectric point | 7.90679931641 |
Runs | 7 |
Runs residual | 0.00401069518717 |
Runs probability | 0.0424962777905 |
Amino acid sequence | MIIYLENPVGSACKLSELISLTRLWDTRSTYKNHLYFYILATNN |
Secondary structure | LEEEEELLLLLHHHHHHHHHHHHHHHHHHHHHHLEEEEEEEELL |
PRMN | - |
PiMo | - |