NONHSAT007367
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT007367 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
519 nt |
Genomic location |
chr1-:166700076..166731506 |
Exon number |
5 |
Exons |
166700076..166700235,166721105..166721168,166721435..166721593,166729908..166729986,166731450..166731506 |
Genome context |
|
Sequence |
000001 CATAGTATTC CATGGTGTAT ATGTGCCACA TTTTCTTAAT CCCATCTATC ATTGATGTTG AACTTGTTTC TCTTTGCCCA 000080
000081 TGAATAACTT TGAAATGCTG GTAGAAGTCA TGGAACTTCT AATTAGAAAA TCGCATCATC TTATAAAAAG TATTTTTCAT 000160 000161 CATTTTATCT CTATTTGTTT CATTCTGTAT AATCTCCACT GATGTATCTT CCAGTCCTCT ATATCTTTTT TCAGCTACAT 000240 000241 TTAGTCTAAT TTTTATGACT ATCTTTTTCA TATATGGAAA TTCTTTTTTT CACAGCTGCA ACCTGAAGTA TAGAAGAGCA 000320 000321 GTTTTACATC TGCTTTTGCT AGGTACTCTA GCATGTTTAT GGTGGGTGTT TCCTTAACTG TGGTGTAAGT TGAATATAGT 000400 000401 CAGTTGGCTT TGTTTCTGGA TGTTTTCAGA GGGTCAAGGC TCTGTGCAGG ATCTTTAGTT GTGACTGACT TGCCCTTGGT 000480 000481 TTCACAGGAT ATGTTAGCAA AATATTTTTG GTGTTGTGG |
Predicted Small Protein
Name | NONHSAT007367_smProtein_254:376 |
Length | 41 |
Molecular weight | 4792.7338 |
Aromaticity | 0.225 |
Instability index | 43.195 |
Isoelectric point | 9.38397216797 |
Runs | 7 |
Runs residual | 0.00302419354839 |
Runs probability | 0.012907865849 |
Amino acid sequence | MTIFFIYGNSFFHSCNLKYRRAVLHLLLLGTLACLWWVFP |
Secondary structure | LEEEEEELLLLHHHHLHHHHHHHHHHHHHHHHHHHHHHLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHL |
PiMo | iiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTo |