NONHSAT007401
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT007401 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1491 nt |
Genomic location |
chr1-:167678500..167696314 |
Exon number |
6 |
Exons |
167678500..167679270,167686995..167687173,167688420..167688611,167690362..167690442,167695659..167695726,167696115..167696314 |
Genome context |
|
Sequence |
000001 AATACAAATA AGATGTTCCA TTTTTCAAAA ATTTGCTGCA AATTTTCATA TTAGATCAAT CATATTTTCT TAAAAGTTGT 000080
000081 GATTGTTGGG AATTTAATCT GTCCTTTGGT ATTATTTATT TGAGTAGATG TTTCCTGTCT GTCACTTCTC ACTAGCATCT 000160 000161 AGGCTCCCTG CTGCATCCCA TACATAAACA GTGCCTTGTG CACTGCCATT TAACAAATAT TTTTAGCATC TACCATATCC 000240 000241 ACTGTGTTAA GCACTAGGAA TACTTCTATC CCGACACTGA TTGCTGGCCC TGCTCAACTT GGTTGCCTTG GCCCAGAACA 000320 000321 GTCTGCCACC TACGGGTTGT CCAATCAATT AACCACTGCA GCAGGGCAAG AATGAAGAGA GCAGGAAATA AGGTATTGAT 000400 000401 AGTGGGGATG AGAAGACAGG ATTTGAGAGA CATTTCACGA AAAGAATTAC AGGACTGGGT ATAAATTGGA TGAGAAGTAT 000480 000481 AATCAAGAGA AAAAGAGTCC CAATTTCTAG CCTGTCTGTC TTTGTCTTCA AGATCTGTTG CCGGGAAAAT TGCTTGAACC 000560 000561 CGGGAGGCGG AGGTTGCAGT GAGCTGAGAT TGCGCCACTG CACTCCAGCC TGGGTGACAG AGCAAGACTT CCGTCTCGGA 000640 000641 AAAAAATAAA AAAGAATGAG CAATGAATGA ATGAATGAAT AAACCGATGA ATGTATGACA TATGAAATAA AATTAATGAA 000720 000721 GTCGCCCAGG CTGGAGTGCA ATGGCACAAT CTCGGCTCAC TGCAACCTCC GCCTCCTAGG TTCAAGCGAT TCTCCTGCCT 000800 000801 CAGCCCCCGG AGTAGCTGGG ATTACAGGTG TGCGGCACCC TGCTCAGCTA ATTTTTGTAT TTTTAGTAGA GACGGGGTTT 000880 000881 CACCGTGTTG GCCAGGCTGG TCTCGAACTC CTGACCTCAG GTGATCCACC CACCTTGGCC TCCCAAAGTG CTGGGATTAC 000960 000961 AGGTGTGAGC CACTGCACCT GGCCACTTTC TTAAATTTCT ATGTAAAACT ACATCATGAA GGACTAGAGT CATATTACTT 001040 001041 GCAGGAGTAC TTGGGGGCGG GAATCCTAGC CTTTTTTTTT TTTTTTTTTT TATTGAGACC GAGTCTCACT CTGTCACCCA 001120 001121 GGCTGGAGTA CAGTGGCGTG ATCTCAGCTC ACTGCTGCCT CCACCTCCCG GGTTCAAGCG ATTCTCCTGC CTCAGCCTCC 001200 001201 CCAGTAGCTG GGATTACAGG CACACCAACA GACTCAGCTA ATTTTTGTAT TTGTAATAGA GACGGGACTT CACCATCTTG 001280 001281 GCTGGTCTTG AACTCCTAGC CTCAAGCTAT CCACCTGCTT TGGCCTCCCA AAGTGCTAGG ATTACAGGCA TGAGCCACCG 001360 001361 CGCCTGCCCA GAATCCTAGC CTTTTCTGAC CTCTTCCTTC GGCATCCTGC TTCCCTCATA GTGTCTTCCT GGCTGCTCCA 001440 001441 GGCGGAGGGT GTTCAGCTCC CATGGAGAAG CCCCACAGCT TTTCAGGATT A |
Predicted Small Protein
Name | NONHSAT007401_smProtein_371:463 |
Length | 31 |
Molecular weight | 3612.2386 |
Aromaticity | 0.0333333333333 |
Instability index | 73.8233333333 |
Isoelectric point | 10.8779907227 |
Runs | 5 |
Runs residual | 0.0355855855856 |
Runs probability | 0.0368132838721 |
Amino acid sequence | MKRAGNKVLIVGMRRQDLRDISRKELQDWV |
Secondary structure | LLLLLLEEEEEELLLHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |