NONHSAT007516
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT007516 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
658 nt |
Genomic location |
chr1+:171142663..171143447 |
Exon number |
2 |
Exons |
171142663..171143015,171143143..171143447 |
Genome context |
|
Sequence |
000001 AGTGATAAAG AGAAATTTAG CATCTCCCTC TCTAGGAAGC TGTATAAACA CACTAACTCC TTATAAGTCT CAGTAAATTT 000080
000081 CTATGTAAAA TTCATAATGT CATGGGTATA GTTTGAGCTA AAATTTACTT CTGCTAACTA TAACTTCTGT TTTTAAGTTT 000160 000161 GCAGAGTAAA TAAATTAAGT GAACAATATT TTGATGGGGG AACTTAGACT ACTGAAGAAA ACAAAATGCA ATCTGGTACT 000240 000241 ATTTTAACAT AAAATCCGTA CAATTAAGAA ATATAACAAT TATAAATAAT TACTTCTTTG CAAAGAAAGT GCTCCCGAAG 000320 000321 GTCCTCACCA CACCTGAAAG TAATCATACT GCAGGCTGGA GTGTAGTGGT GCAATCTCAG CTCACTGCAA CCTCCACCTC 000400 000401 CCAGGTTCAA GCGATTCTCC TGCCTCAGCC TCCCAAGTAG CTAGGACTAC AGGCGCACAT CACCACACCG GGCAAAATTT 000480 000481 TATATTTTTA GTAGAGACAG TGTTTCACCA TGTGGGCCAG GCTGGTCTTG AACTCCTGGC CTCAAGTGAT CCTCCTGCCT 000560 000561 CAGCCTCCCA AAATGCTGGG ATTATAGGCA TGAGCCACCA CACCTGAATA ATTCTTGTAT TTTTAGTAGA AACGGGGTTT 000640 000641 CGCCATGTTG GCCATACT |
Predicted Small Protein
Name | NONHSAT007516_smProtein_509:586 |
Length | 26 |
Molecular weight | 2901.5786 |
Aromaticity | 0.08 |
Instability index | 59.836 |
Isoelectric point | 11.0003051758 |
Runs | 5 |
Runs residual | 0.00830188679245 |
Runs probability | 0.0462462462463 |
Amino acid sequence | MWARLVLNSWPQVILLPQPPKMLGL |
Secondary structure | LHHHHHHLLLLLEEELLLLLLLLLL |
PRMN | - |
PiMo | - |