NONHSAT007533

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT007533

Source

NONCODE4.0

Same with

,

Classification

sense

Length

3771 nt

Genomic location

chr1+:171478699..171484935

Exon number

3

Exons

171478699..171482311,171483675..171483769,171484873..171484935

Genome context

Sequence
000001 ttttttttaa aaaagagttg atgcccagtt tcccccctgc ccccagattt gtatacagca agAGTTGAGA ATCACTGCTT 000080
000081 AGAATATATC TGCTTATAAT AAGTCGGTAG GTCTTAACAT TTTTGTAAGT CTTAGTCAat ctggaagact tgctatagag 000160
000161 tgctgggccc cttcctcaga gtttgattca gtaggtctgg gttgggacct gagaattttc atttttaTCC TATTTCTAGA 000240
000241 GAAACATGGT TTCTCTAGAA TCACATGTCT CAGAAACATT Gtttcttttt tttttttttt tttttttttt gagacggagt 000320
000321 cttggtctgt cacccaggct gtagtacagt ggcatgatct cggctcactg caacctccac cttccgggtt caagtgattc 000400
000401 tcctgcctca gcctcccgag tagctgggat tacaggtgcc tgccaccatg cctggctaat ttttgtattt ttagtagaga 000480
000481 cggggtttca ccatgttggc caggctggtc ttgaactcct gacctcaggt gatcgcctgc ctcagtctcc caaagtgctg 000560
000561 ggattacagg tgtgagccat cgtgcccggc cAGAAACATG GTTCTGCGAA ccgcagtagc agtaggtgta ggaaggaaag 000640
000641 tttggatgtt agatacaggt tggtttggag atttgctcct aggaagttta aggagttctt ttctcatgat gttgctttct 000720
000721 ctctaatata cagaaagggt cttcaccaag agtgCTGCTT GAGTAATAAT GGTGTTCAGA AAAGTCCAAG ATTTCAGGAT 000800
000801 TCTTAGTTAA ATAACTTAAG CAAGTTGACT GTTTTTCTTG ATACATCAGT TCCTTTTTTT TTCACCTGAT GAAAAAGCTC 000880
000881 tttgaatttt aattttgtca ggtagtgaat atttactgtc ctcttttgtc actgtagatg aatattcttt ctatatcttt 000960
000961 gtacatgtta ctggtaaatt tgccaatagg atagATTTTG GTAGTACATT CTCTTTTCAC AACATCATCA TCATTAGCGG 001040
001041 TCTTGGGGTA AAATTAATTG TATACATTCT TCTACATATA GTAGCAAATT GTATTAGTGT AGTCCTATTG GTTGTAGGTC 001120
001121 AGTCTTTTTT CAGGTTGTCG GTTGTCTCAA GGAAAGATGG TTTATTGTAA ACGTATACGT GAAAAGCGAA ATGGTTATCT 001200
001201 ACACTGTTAT GTGGGAGGAG GCAGCATAGT GTAATGGATT GAACCCGACA CCCTAGTTTC AAATTCAAtc tgatttagtc 001280
001281 tttatgtgta aaaatcaaga cagtaactac attgtaaagt tgtttgactg aaatgagata atagaggtga gaatgcctga 001360
001361 taaattttat ggaactatac aaacgttggg tggcattTTA CATGCATATA AAATGACATC TCTGCTGATT CTGTAATTGA 001440
001441 CAAATATAAA ACTAACGGAT GAAACGAAAT TTATAAAAGT AAAGTGGATA TAGGCTTTAC TTTGATGCTT TTTGCTTGGT 001520
001521 ATACCTATTC TATACTATCT TTGGCTCCTG TGTTTCAGTT CTCAATGTTT TCAGCTATTG ATCGTTTCTA TGGTAGAATT 001600
001601 AGCCATCTTC TACCCTACTG CTACAATAAC CCCTcaaaaa caaaaacaaa aacaaCCGTT AGGTTGATAT GTATCTACAA 001680
001681 CTTAATTAAA TTGAAGGGAA ATAGCATGAG ACATAATTTT TCTTTTTTGC CTATCTATTA ATAGACTAAG TTAGGGTGCA 001760
001761 TCACCAAGAT GAGGGTACAT TAGCTCTAAA GATGAGGATT CTCTTTGTAT TTGAATGCTT ATGAAAATGT TATTTATTTC 001840
001841 TAACAACTTC TCATATGTAA GGGAACTTTA TATATGCTTT GAAAAAAATG GATACTATTT TTTGAATATT TAGTCCTCAG 001920
001921 TGATGAAATA GGTTATTTTT ATATACCTTG TGTTTGTGAG ATGTTTTACC TTTTACGAAA TGAAGAGAAC ATAGAACGTT 002000
002001 GTTTCTGTTC TAAACTGTTA AAGTTAATAG AGCTTTGTTG GGCACATACT GCCTGATGAT GATACAGGGA TGTAATATGT 002080
002081 AGGGGAATGA AGATGTTGTC CTGTCATTTG GATTCCATGT GCATAGGTTG ATGTGTCAGT CATTTCAAGC ATATTAAATT 002160
002161 GGATAATATA TCTTTTTAAA ATAGACAGTC TCAGTGGGTT CACTGTGTTT TAACTATTCA CGACAGCATG GAATTATAAC 002240
002241 CCTTATTCTC TATGATAGAG TTAAGCAGTT ATAACCATAT ATAACTGATA TGTTTCACAA GTGCATGATA GCTTATTGTG 002320
002321 ATCAATTTTG TTGTGTATTG GTTATTGGAA TTTGACAGTT AAAAAGTTCT ATGAAATTAT CATTGATATG GGAAGTTTTT 002400
002401 TCAGAATTTC TGTGAACATT TGAATTTACT GAGTTTTTCA TCCTTATTTT TCTTTCTTAT GTACATCTTA AGGACTGGGG 002480
002481 TTTTAAGGGG TGTGGCAGGA GGTTTTGGAC TCGATGAGTT TCCACCGAAA TGTCGGAGAA GTCAGGCCAG AGCACAAAAG 002560
002561 CAAAGGATGG GAAAAAGTAT GCAACACTCA GTTTATTTAA TACTTACAAG GGGAAATCAT TAGAAACACA GAAAACCACA 002640
002641 GGTGAGTAAA ATCAAGTGAC ACTTATGTTT TTCATGGTTT GTTTTGTTAC TATAAGTGAT ACACCTGCTG CTATGAGAAG 002720
002721 CTAGGATGTA CCCAAGTTAA TACAATGCTA TTTACATTTG CGTTTTTATG CATGCACACA TTTTTCAGAG GATATGTGAT 002800
002801 AAACATCTTA TAATTGAAAA TTTATACTTT CATAGAGCCC TTTAAAAATA TTTTTGTTTT TCTCTGTTGT CAGCAGAAAA 002880
002881 AAGGTAGAAC TGTGTGGCTC TAAAGGGGAA ACTCAGTCAA TGAGATTGAT AGGCACAGAC CTATATATTA GTGGGAATTT 002960
002961 AGTATCTTTT TAATTATAGA CTAGAGAAAG TCTTATGTTT Cgtgtgtggg ggtgtgtgtg tgtgtgtgtT AGATACTGTG 003040
003041 ACCTAGTGAA TATAGTGAAA ACTGAAAATC ATGCATGGCA TATTAACAGT ATTCTTTATG AACATACAGT CAATACATTT 003120
003121 ATTCTCTAAC ATTCTAAGTT TTGAGTTTGA AATAGATTCT CTGAAAAAAT ATCAGTATTA TCAATGTTTT CTGTAGTGTG 003200
003201 TTGAATTGCA TTGTTAAATT TTTTAAGGAA TCTGTTAAAT GCTGTTAAAT GGCTTGATTT CTACACTGAA ATGTGTTGCA 003280
003281 GGTGTGTAGC TTAGttttaa aattattatt ttaaaataCA TGAATGAAAA TCATTCAGGG ATTGCATTAA TTCCTATTGT 003360
003361 TTTTCTATAT TGTTTGAGGA ATAAAATGGG TAATAAAATA GATGTTCTAA GAAAGTTGAT GTTATTGATC TTTAGTTGCA 003440
003441 GCTCGACATG GATTACAGAG TCTTGGAAAA GTCGGTATTT CACGGCGTAT GCCTCCACCT GCTAACCTCC CAAGTCTTAA 003520
003521 AGCAGAAAAC AAAGGCAATG ATCCTAATGT AAACATTGTA CCTAAAGATG GCACAGGGTG GGCATCAAAA CAAGAGCAAC 003600
003601 ATGAAGAAGA AAAAACACCA GAAGTGCCAC CAGCACAGCC AAAACCTGGG GTTGCAGCTC CCCCAGAAGT AGCACCTGCT 003680
003681 CCCAAATCAT GGGCCAGTAA CAAGCAAGGA ATCCAAGTGA ATAGTCAGTT TCAGCAAGAA TTTCCCAGCC TGCAGGCAGC 003760
003761 TGGGGATCAG G
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Predicted Small Protein

Name NONHSAT007533_smProtein_353:574
Length 74
Molecular weight 7641.6823
Aromaticity 0.0547945205479
Instability index 52.8232876712
Isoelectric point 6.55926513672
Runs 15
Runs residual 0.0613345117101
Runs probability 0.0327680621799
Amino acid sequence MISAHCNLHLPGSSDSPASASRVAGITGACHHAWLIFVFLVETGFHHVGQAGLELLTSGD
RLPQSPKVLGLQV
Secondary structure LEELLLLLLLLLLLLLLLHHHHHHHHLHHHHHHEEEEEEEELLLLEEELHHHHEEELLLL
LLLLLLLEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL
LLLLLLLLLLLLL
PiMo oooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiii
iiiiiiiiiiiii