NONHSAT007757

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT007757

Source

NONCODE4.0

Same with

,

Classification

intronic(AS)

Length

1945 nt

Genomic location

chr1+:175526124..175533005

Exon number

2

Exons

175526124..175526435,175531373..175533005

Genome context

Sequence
000001 TGAAGCAAGA AGGCACATTG GAAAGGTCTA TGTTTCCAGT ATAAGACAGG GAGCTGAGGA TGTCTCCCCA CTGCCCAATA 000080
000081 ATCAGGAATT GAAGGCAGCC TCTCACAGAC AGTCAGCAAG AATCTGAGGC CTTCAGCCCA ACAAGCCAGA AGGAAATGAA 000160
000161 TTCGCTAACA ACCACATGAC ACTGGAAGCA GACCTTTCTC CAATTGAGAA GAGACCACAG TCCTGGTCAA CATCTAGGTT 000240
000241 GCAGCTTTCA GATGAGACCC TGAGCCAGAG GACCCAACAA AGCCATGCAC AGACTCCTGA CCCACGGAAG TGCACTGAAG 000320
000321 AAGCCTGATG GAAATTTTAT AAATTCAGTG GCTCCCAAGT TCTCTAACCA AGCCTTCCAC CCTCACCATC ATTCAATAAA 000400
000401 TGCTCAACTC AGACACATTT ATATGCCCAA GTGCCTCACA TGGCCAGTGA TTCCTAAGTG CTAAACAGAT TTGTTCTGGA 000480
000481 CTTGGAGTCT GAGCCTAAGG AGCAAGGCTG AGATAATTTA AGCACCTCTT GTAACAGAAG GCAACTGGAA TTCAATAGAG 000560
000561 ATAAATGTAA AATGTTGAAC TAGGGAGCTG AACCATTGGC AGGGTAGAAT TCTAAATGGA AAGGTTATGG CTGAATGACT 000640
000641 AAGCAAGGGA GAACACACAC CATACCCAAG GAATTCTTGC AGAAATGCAA GTCTTGGGTG GACCCTGCAG AGAACAAGAG 000720
000721 ACAGGATGTG GTAGAACAGC ATGGCCAAAG GAGAGCTACT GGGGCTCAGT AGAGGCCACT ACTGGGAAGT CTCCCTCCTG 000800
000801 AGGCAGACTG TCTGACAAGG GACAGAGGGA TTTGGCTGGC TATGTCAAGC TGCAGGTTTT AGCTGCTGTC ATGAGCAGTC 000880
000881 CATTTTGCTT TTTCTCTGCC AGGCTCCAAA CACCAGAAGT AAAACATCTA ATGATAACCT GAGGTATTGG CTGTGTCTAC 000960
000961 TAGGAAAACA AAAACAAAAA CAGCCACTCA GGTTGATTAA TTCAATCAAA TGATTGGCCA AGTTCCACGA AGAGATCGAT 001040
001041 AGAATCAGTG GTTGACCAAA TGGAGAGGTT GAATCAGGAA GCATGATTGA TCCCATAACC CCATGCAGAG TCAGCCAAGC 001120
001121 AAGGCAATGT ATTTGTCCAT GAAAGGGTCT CTTGGGTGCC CACAAATTTG TCTTGCAATG AGTCCATGAC ATTGGCACGG 001200
001201 GCCTGAAATA CATCTGACAT GGTTCTCTCT TTTCCTTCTT TTAAAGTATG TTTTCATACA ATTAACGGAA GGGCAGGAAT 001280
001281 TTGCCCTCTT TTAGATTGGC CACACCAGGA ACAGAAAAAG GGAATGGAGA AAGCCAGTAA AAAGGCAAGT GGATGAACAC 001360
001361 AGGCTATGAT TCAAAAAGTT TTCAAAGCAG TCAACACATT TCTTGGGACA CAAAAATTAC TTGCAGTATT TTCTGGACAA 001440
001441 GATCCATCAA CACTTAGCAA ACTAGCAATC CCCACGAAAG CACTTCATTC CTTAGCTAAC GGTTTGCCTA TTTCATGCTC 001520
001521 CTCAACAGCC TATCAAAGGG TATTAAAAGA CACACCAGTT ACTAGCCTTG AGAACAAAAG AGGTGACACA AGCCCAATTT 001600
001601 CTCCCTTTGC TTAGCCTCCT CAATGTCCAC TTTGACAGCC CCCAGTCCCT AATGAAGAGG GCATCCATCA ATTAAATTAG 001680
001681 GGCAGCCTTA CAAATCTCTA TAGAGTGTTG ACATATATAC TAAGCTCTTT TGGCCCAAGT TCCAAATTCA TTCCTCGCTT 001760
001761 TTGGCAAGGA GCAACATGGA GACTTCTGCT GGGAAAACGC ATCGCTATTG GAATGCATGA GAAAGACGAG CTGTGAGTGC 001840
001841 TGGTATTGTC CTCACACACA CTCTCCTGCC TTCTATTTTC CAATCAACTG TGAACAATTG GGTCCTTTCT GACATGTTGG 001920
001921 CTGGGTGATA AAGGTTCTGT CTTAC
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Predicted Small Protein

Name NONHSAT007757_smProtein_284:463
Length 60
Molecular weight 6766.8646
Aromaticity 0.0847457627119
Instability index 43.6627118644
Isoelectric point 10.0422973633
Runs 6
Runs residual 0.0427616233867
Runs probability 0.0413354531001
Amino acid sequence MHRLLTHGSALKKPDGNFINSVAPKFSNQAFHPHHHSINAQLRHIYMPKCLTWPVIPKC
Secondary structure LLEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHEELLLLLLLLLLLLL
PRMN -
PiMo -