NONHSAT007757
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT007757 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
1945 nt |
Genomic location |
chr1+:175526124..175533005 |
Exon number |
2 |
Exons |
175526124..175526435,175531373..175533005 |
Genome context |
|
Sequence |
000001 TGAAGCAAGA AGGCACATTG GAAAGGTCTA TGTTTCCAGT ATAAGACAGG GAGCTGAGGA TGTCTCCCCA CTGCCCAATA 000080
000081 ATCAGGAATT GAAGGCAGCC TCTCACAGAC AGTCAGCAAG AATCTGAGGC CTTCAGCCCA ACAAGCCAGA AGGAAATGAA 000160 000161 TTCGCTAACA ACCACATGAC ACTGGAAGCA GACCTTTCTC CAATTGAGAA GAGACCACAG TCCTGGTCAA CATCTAGGTT 000240 000241 GCAGCTTTCA GATGAGACCC TGAGCCAGAG GACCCAACAA AGCCATGCAC AGACTCCTGA CCCACGGAAG TGCACTGAAG 000320 000321 AAGCCTGATG GAAATTTTAT AAATTCAGTG GCTCCCAAGT TCTCTAACCA AGCCTTCCAC CCTCACCATC ATTCAATAAA 000400 000401 TGCTCAACTC AGACACATTT ATATGCCCAA GTGCCTCACA TGGCCAGTGA TTCCTAAGTG CTAAACAGAT TTGTTCTGGA 000480 000481 CTTGGAGTCT GAGCCTAAGG AGCAAGGCTG AGATAATTTA AGCACCTCTT GTAACAGAAG GCAACTGGAA TTCAATAGAG 000560 000561 ATAAATGTAA AATGTTGAAC TAGGGAGCTG AACCATTGGC AGGGTAGAAT TCTAAATGGA AAGGTTATGG CTGAATGACT 000640 000641 AAGCAAGGGA GAACACACAC CATACCCAAG GAATTCTTGC AGAAATGCAA GTCTTGGGTG GACCCTGCAG AGAACAAGAG 000720 000721 ACAGGATGTG GTAGAACAGC ATGGCCAAAG GAGAGCTACT GGGGCTCAGT AGAGGCCACT ACTGGGAAGT CTCCCTCCTG 000800 000801 AGGCAGACTG TCTGACAAGG GACAGAGGGA TTTGGCTGGC TATGTCAAGC TGCAGGTTTT AGCTGCTGTC ATGAGCAGTC 000880 000881 CATTTTGCTT TTTCTCTGCC AGGCTCCAAA CACCAGAAGT AAAACATCTA ATGATAACCT GAGGTATTGG CTGTGTCTAC 000960 000961 TAGGAAAACA AAAACAAAAA CAGCCACTCA GGTTGATTAA TTCAATCAAA TGATTGGCCA AGTTCCACGA AGAGATCGAT 001040 001041 AGAATCAGTG GTTGACCAAA TGGAGAGGTT GAATCAGGAA GCATGATTGA TCCCATAACC CCATGCAGAG TCAGCCAAGC 001120 001121 AAGGCAATGT ATTTGTCCAT GAAAGGGTCT CTTGGGTGCC CACAAATTTG TCTTGCAATG AGTCCATGAC ATTGGCACGG 001200 001201 GCCTGAAATA CATCTGACAT GGTTCTCTCT TTTCCTTCTT TTAAAGTATG TTTTCATACA ATTAACGGAA GGGCAGGAAT 001280 001281 TTGCCCTCTT TTAGATTGGC CACACCAGGA ACAGAAAAAG GGAATGGAGA AAGCCAGTAA AAAGGCAAGT GGATGAACAC 001360 001361 AGGCTATGAT TCAAAAAGTT TTCAAAGCAG TCAACACATT TCTTGGGACA CAAAAATTAC TTGCAGTATT TTCTGGACAA 001440 001441 GATCCATCAA CACTTAGCAA ACTAGCAATC CCCACGAAAG CACTTCATTC CTTAGCTAAC GGTTTGCCTA TTTCATGCTC 001520 001521 CTCAACAGCC TATCAAAGGG TATTAAAAGA CACACCAGTT ACTAGCCTTG AGAACAAAAG AGGTGACACA AGCCCAATTT 001600 001601 CTCCCTTTGC TTAGCCTCCT CAATGTCCAC TTTGACAGCC CCCAGTCCCT AATGAAGAGG GCATCCATCA ATTAAATTAG 001680 001681 GGCAGCCTTA CAAATCTCTA TAGAGTGTTG ACATATATAC TAAGCTCTTT TGGCCCAAGT TCCAAATTCA TTCCTCGCTT 001760 001761 TTGGCAAGGA GCAACATGGA GACTTCTGCT GGGAAAACGC ATCGCTATTG GAATGCATGA GAAAGACGAG CTGTGAGTGC 001840 001841 TGGTATTGTC CTCACACACA CTCTCCTGCC TTCTATTTTC CAATCAACTG TGAACAATTG GGTCCTTTCT GACATGTTGG 001920 001921 CTGGGTGATA AAGGTTCTGT CTTAC |
Predicted Small Protein
Name | NONHSAT007757_smProtein_284:463 |
Length | 60 |
Molecular weight | 6766.8646 |
Aromaticity | 0.0847457627119 |
Instability index | 43.6627118644 |
Isoelectric point | 10.0422973633 |
Runs | 6 |
Runs residual | 0.0427616233867 |
Runs probability | 0.0413354531001 |
Amino acid sequence | MHRLLTHGSALKKPDGNFINSVAPKFSNQAFHPHHHSINAQLRHIYMPKCLTWPVIPKC |
Secondary structure | LLEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHEELLLLLLLLLLLLL |
PRMN | - |
PiMo | - |