NONHSAT008337
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT008337 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1025 nt |
Genomic location |
chr1-:182806324..182809019 |
Exon number |
2 |
Exons |
182806324..182807069,182808447..182809019 |
Genome context |
|
Sequence |
000001 GGCTCGTCCC TTCCCCCACC CCCAGCCGCC GCCGCCGCCC GCGCTTCGCA ACAAAGCCGG CTGCGGAGCC ATGGTCCACG 000080
000081 GCGCCCGCCC GCGACCCCGC CGCCCCGCAT GGTAGCCGGA ACGTCTCTCC CTTACCAGCC TTCGCTTCCT GGTGCCCAGC 000160 000161 TCTTAGGACC GTGTGTGACT CTGGCCTTCT ACCGAGACAA CAGAGAAACG CACAGCAACT CGCATGGAGG AATCGGCGAA 000240 000241 ATGGCTCCGA CCGCGGCGCT AGGGGGCGGG GCCAGCGAGC GGTGTTGAAA GCAGCAGGGG CCTAGAAGAC ATTAAACCGA 000320 000321 TACCACAGAA ATACAAAGGA TCATTAGAGA CTATTATGAA CAACTATATG CCAACAAATT GGAAACCAAA TGGAAATGGA 000400 000401 TAAATTCCTG AACAGATACA ACTTACCAAA ATTGGACCAA GAAGAAATAG AAAACCTGAA AAGACCAACT ATGAGTAATG 000480 000481 AGATTAAATC AGTAATATAG AGTCTCCCAT CAAAGAAAAG TCCAGGCCCT GATGGCTTCA CTGCTGAATT CTACTGAACA 000560 000561 GTTAAAGAAG AACTCATACC AGTTCTCAAA CTCATCCTGT GAGGGCAGCA TTACCCTGAT ACCAAAACTA GATATGGACA 000640 000641 CAAGAAAAAA AATCTATAGG CCAGTATCCC TGATGAACAT AGATGCAAGA ATCCTCAACA AGACCAGGTG TGGTGGTTCA 000720 000721 TGCCTGTAAT CCCAGCACTT TGGGAGGCCA AGGCAGGTGG ATCACCTGAG GTCAGGAATT TGAGACCAGC CTGGCCAACA 000800 000801 TGGCAAAACC CTGTCTGTAC TAAAAATACA AAAATTAGCC GGGCAAGGTG GCGTGTGCCT GTAATCCTAG CTACTTGGGA 000880 000881 GGCTGAGGCA GGAGAATTGC TTGAACCTGG AGGGAGGAGG GGCAGAAGTT GCAGCGAGCT CAGATCGTCC CACTGCACTC 000960 000961 CAGCCTGGGT GACAGAGTGA GACTCCATCT CAAAATAAGT AAATAAATAA AGAGACTCAA CTAGC |
Predicted Small Protein
Name | NONHSAT008337_smProtein_719:979 |
Length | 87 |
Molecular weight | 9604.9132 |
Aromaticity | 0.0697674418605 |
Instability index | 89.9476744186 |
Isoelectric point | 9.49041748047 |
Runs | 9 |
Runs residual | 0.0349704963554 |
Runs probability | 0.0490686765196 |
Amino acid sequence | MPVIPALWEAKAGGSPEVRNLRPAWPTWQNPVCTKNTKISRARWRVPVILATWEAEAGEL LEPGGRRGRSCSELRSSHCTPAWVTE |
Secondary structure | LLLLHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEEEEELEEEELHHHHHHHH HLLLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |