NONHSAT008338

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT008338

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1023 nt

Genomic location

chr1-:182806324..182808387

Exon number

2

Exons

182806324..182807069,182808111..182808387

Genome context

Sequence
000001 GGCGGGGCTC AGCAACCTCG CGGCGCGGAA GGGTTTCGTT GCTAGGGAGA TGGGCTGAGC CGGGCGGGCA TCGCGCCAGA 000080
000081 CCTGCTACTC TGGATAATCC ACTCTCCTGG ATAATCCACT ACCCTGGATA ATCGGCTGCC CGCTTTTGCG CATGTTAGGG 000160
000161 AGTTGACGGC CTGTAGCATT CTGATGCAGC AAAATATTTC GCAGGGTCTG TCATAGGGAT CTCCGGTGAG AGGAGGTTCC 000240
000241 CTTCGAAGGC AGAACTGGAA ACCTTGCTGC TAacttgGGT GTTGAAAGCA GCAGGGGCCT agaagacatt aaaccgatac 000320
000321 cacagaaata caaaggatca ttagagacta ttatgaacaa ctatatgcca acaaattgga aaccaaatgg aaatggataa 000400
000401 attcctgaac agatacaact taccaaaatt ggaccaagaa gaaatagaaa acctgaaaag accaactatg agtaatgaga 000480
000481 ttaaatcagt aatatagagt ctcccatcaa agaaaagtcc aggccctgat ggcttcactg ctgaattcta ctgaacagtt 000560
000561 aaagaagaac tcataccagt tctcaaactc atcctgtgag ggcagcatta ccctgatacc aaaactagat atggacacaa 000640
000641 gaaaaaaaat ctataggcca gtatccctga tgaacataga tgcaagaatc ctcaacaaga ccaggtgtgg tggttcatgc 000720
000721 ctgtaatccc agcactttgg gaggccaagg caggtggatc acctgaggtc aggaatttga gaccagcctg gccaacatgg 000800
000801 caaaaccctg tctgtactaa aaatacaaaa attagccggg caaggtggcg tgtgcctgta atcctagcta cttgggaggc 000880
000881 tgaggcagga gaattgcttg aacctggagg gaggaggggc agaagttgca gcgagctcag atcgtcccac tgcactccag 000960
000961 cctgggtgac agagtgagac tccatctcaa aataagtaaa taaataaaGA GACTCAACTA GCA
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Predicted Small Protein

Name NONHSAT008338_smProtein_716:976
Length 87
Molecular weight 9604.9132
Aromaticity 0.0697674418605
Instability index 89.9476744186
Isoelectric point 9.49041748047
Runs 9
Runs residual 0.0349704963554
Runs probability 0.0490686765196
Amino acid sequence MPVIPALWEAKAGGSPEVRNLRPAWPTWQNPVCTKNTKISRARWRVPVILATWEAEAGEL
LEPGGRRGRSCSELRSSHCTPAWVTE
Secondary structure LLLLHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEEEEELEEEELHHHHHHHH
HLLLLLLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -