NONHSAT008357
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT008357 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
561 nt |
Genomic location |
chr1-:183430945..183441985 |
Exon number |
5 |
Exons |
183430945..183430974,183438809..183438934,183439600..183439675,183439855..183439977,183441780..183441985 |
Genome context |
|
Sequence |
000001 CTCAGCCCGG GCGGTAGGGG CTAGGCACCC ATACCCGTTC CGCCCCCTCC CGCAGATCCC CTTGCAGTCT CCGCCGACCT 000080
000081 GCCCGGCGAG GAGAGGACGC AGCAACTCCC CCGCCACCCC GGACTTACCT CGGTGTCTGT TGCTCCATGC CCCAACCTGC 000160 000161 GGCCCGCTCC CCCTACGTAC CAGCCCGGCC TCGGCACTCA CCGGAGGTTT CGGGCCAAAA AGCTGAAATA AAGAACGAAG 000240 000241 TCAATAATAA TATGAAGTGT ATGAGAAATA GCTGGAAAAT TCATCATCCA TGACTTGAAG AAATTGACGT TTTACAAGTT 000320 000321 ATATTTTCGG TGAAGAGGCA CTTTCAAGAT CCTTCTCTGA GACCTGCACC AATAAGACTA TACCAATGTT CAGTTGAAAC 000400 000401 ATCAGacact gttctggtta tgatggacac cacagtgaaa gagacctggt ccctgccttg aggaaaccca actgctggta 000480 000481 gagagctcag agtaatgatt aggatgcaat atgagggatg cagtaattgg gATCTACTTC TGGGAACCGT CACAGCCTGA 000560 000561 G |
Predicted Small Protein
Name | NONHSAT008357_smProtein_146:292 |
Length | 49 |
Molecular weight | 5520.2793 |
Aromaticity | 0.0416666666667 |
Instability index | 86.7833333333 |
Isoelectric point | 10.1775512695 |
Runs | 7 |
Runs residual | 0.0197368421053 |
Runs probability | 0.0343831226184 |
Amino acid sequence | MPQPAARSPYVPARPRHSPEVSGQKAEIKNEVNNNMKCMRNSWKIHHP |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHLHHHHHHLLEELLLL |
PRMN | - |
PiMo | - |