NONHSAT008394
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT008394 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
675 nt |
Genomic location |
chr1+:184633030..184642635 |
Exon number |
2 |
Exons |
184633030..184633562,184642494..184642635 |
Genome context |
|
Sequence |
000001 cgacaagatc gttttcctta aagggtggct gtgagccttc aattacacag tgatgaaaag accttagcac agtgctgggc 000080
000081 aACGGCTAGC TACTTCAGAG GCACAGCTGA GACTTGCACA GAGGTACCTG GCTGCAAAGT CCGGCTCCTC TACACTCTGC 000160 000161 AGAGCTGTTT TCCCCCTTCA GAGCTCCTCT CCTCCGGGAG GGCTTGCCTC GCCCCGGTCC AGGATCTCTG CCTTCGGTTG 000240 000241 AAGCGCAGCG CCCCCAGCCG TCCGCAGGAG GGATCGACGC CTCTGTCTCC CCGAAGTGAG GGCGCTCGCT GCGGAGCTGG 000320 000321 GGGTGGTCTC CTCTTCCCCC CATCGCGGCC CAGCAACCTG GGGGTCCGCG TGACTTCTCC CTGGCCGGGG GATGGAGGAT 000400 000401 GCGCTCTCCT CTGTCCCTTC AAGGCCTCTT CCTCGTCCCA GGTCGAGTCT CCTCCTTGCT GACCAGGCAT CGCGAGCAGA 000480 000481 TGAATCCTCT GGGCGGTTGT CCCTGTCAGG CTGTCAGGAC CTGATTTTCC CTGaccccgc acctgatgaa tcagctggca 000560 000561 ccacccagat tgaaaaactg gctcatctga tcttgtggcc ccctacccag gaactgactc agcgcaagag gacagcttcg 000640 000641 actgcctgtg acttcatctc caacccagcc aatca |
Predicted Small Protein
Name | NONHSAT008394_smProtein_398:523 |
Length | 42 |
Molecular weight | 4507.296 |
Aromaticity | 0.0243902439024 |
Instability index | 59.4195121951 |
Isoelectric point | 11.4022827148 |
Runs | 7 |
Runs residual | 0.00523716893611 |
Runs probability | 0.049221490398 |
Amino acid sequence | MRSPLSLQGLFLVPGRVSSLLTRHREQMNPLGGCPCQAVRT |
Secondary structure | LLLLLLLLEEEELLLLHHHHHHHHHHHLLLLLLLLLLLEEL |
PRMN | - |
PiMo | - |