NONHSAT008492
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT008492 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
2035 nt |
Genomic location |
chr1+:190111248..190247013 |
Exon number |
5 |
Exons |
190111248..190111453,190200147..190200242,190201075..190201166,190211724..190211864,190245514..190247013 |
Genome context |
|
Sequence |
000001 AGAAAATAAT TGATGAATTA GACTTTATTA ATGGCAATCC ACATTCTGGT TGGCCACATT TACAAGTCAG AAAAAAAGTG 000080
000081 CTTGCCTCAG AATATGTAAA TAATTATTTT CAACTAATAA TGGGAATACA AACATCTCAA TAAAAATGAA CAACATAATT 000160 000161 GAAGAAACAT TTTACATAAC CTGATATATG AAAGGTCAAG AAGCACTCTT GATACTAAAA ATTTTAAAAA TATTTCTGAC 000240 000241 AAATTATAAC TATCATATGT AATATGCAGT TCAATAGAAG TACACTTATT ATAAGTATGA AGTAATGAAA GAGGAGAGTT 000320 000321 TCAGAAGTTC TTTATTAAAA AACTGTGATA ATTTCAGGAT TCTCTCAATA ATATATCTAA ATTCAGAAGA TTCCTAATTT 000400 000401 TAATAAACCA ATTTTTTAAA AATATTAGAA GTTTATAGAA CTGCATTTTT AAAAGGTAGT GTTTGGTTTT TTTATTTGCC 000480 000481 TTTTACAGGA GAAATAGTGA TACTCGAAAC ATAAGGATCG AAAGTATGAT TGCAATATAC AGAACATAAT TCACATAGTG 000560 000561 AAAAGTGAGA ATTGACTATT TCTGAAATTA AATGAGCATA TTCAGAGTTC TTATTCTTAT GGGAATGCAA ATAACCCAAA 000640 000641 AAATTATAAT TGATATTTTA TCCATATTGT ATCTTACTAA CTTCTGACTT ACACTTTCTT TAAAAGACAC ACACACACAC 000720 000721 ACACACACAA TATTTTGTAA AACTTTTTAG ATAAGTGAAC TACATTGGAG GCATAGTTTT ACATACACAC ACACACATAC 000800 000801 ACACACACAC ACATATATAT ATACTACATG AGAATTGAGG TAGCATACAT TGTTTTAAAT CACTATTGTA TGAAGTTAAT 000880 000881 ACTATTTTTG CACATTGATC ATGAATTTTT TATTCCAACA ATGAAGAGAA TTTTTTTTGT ATTGAAACAA AATTAAATAT 000960 000961 CTAAAAAATG CTTAAGTTTA GCCATAGAGT AATCAAAATG TATATTATCT TAAGAAATAC TTTCAGAAAA AAAATTAAAA 001040 001041 GGACTTGCAA ATGAAAAAAG TATATTGTAA CTATTTCTGC TAATAATTTA ATTATAGCTT TTTAAATTGT ACATTCAATA 001120 001121 ACAGTGGTCA AACTGAACTT GCTTTTATGA TGCCTAGAAT AAAAACTATT CTTCAAAGTT TTTCTAAATT AACAAATCTT 001200 001201 ATTATATTGT CTATTTGATC CTGAAATAAA TTTTGGTTTT ATATATATAT ATATATATAT ATATATATAT TTATATTCAG 001280 001281 AAAAGAAAAC TTTTTCCCTG CATTCCTCTA CATGAGAAAT TGTTTTTTGT AAACAATCCT CACTGTTAAC ATGTGTCTGA 001360 001361 TGGCCCACAG AGCTGCAGTG AGTTAACAGA AAGGCATAGT GTAGGAAAGA GGCTGCCCAT GAAAACTCCA CCTCTTACTC 001440 001441 TTCCTCCTTT TGTGGATGTG CTTGTCAGGA GATCACAGGC TTTGTTCTGC TCCTCACTGC CTTAGAGCTG AGAGAGACAA 001520 001521 GAGTACTAGC GGAGGAACTC ACAGGTTTCC TGGCTACTAT GACTGGTTGG ATAACGCTAT ATAATTCAGG AGATGCGGAT 001600 001601 AAGGGCACAT TTAAAATTTC TATAAATATT TTGTTATAAC ATTTAATACA TTTTTAATGA ATATTTTGGT CTCTATGTTC 001680 001681 CTTAGTGTTT TGTCTTTTAA AATTGATCCA GAACACAGTT TTGTTGCATT ATAGTAAACT CTCTTTCTCC CCCTAATTAA 001760 001761 AGCCCACCAA TTTTAAAGTC ATTATTTTTT GTCATATTCA CTTATATTTT GTATTTTGTA TTCAGTACAC AGATACACTT 001840 001841 TAATTTTAGT ATTTGTCATA TATTGAATTA TAATAAAGGT ATTACAAAAA TGGTCATTAA ATATATTCCA TAGCTAGAAA 001920 001921 TCAATATTTC CCAGAAGTGC AGTCTTTTTC AAGATTGATT CTTTCAATTG AGTAGCTTAT TTTAGATATT CAAACAGTGA 002000 002001 TGGAATTTAG ATATCATTAT CCAAAATAGA AGCAA |
Predicted Small Protein
Name | NONHSAT008492_smProtein_827:955 |
Length | 43 |
Molecular weight | 5226.3412 |
Aromaticity | 0.166666666667 |
Instability index | 58.3404761905 |
Isoelectric point | 9.03533935547 |
Runs | 6 |
Runs residual | 0.0333031946956 |
Runs probability | 0.0136607195431 |
Amino acid sequence | MRIEVAYIVLNHYCMKLILFLHIDHEFFIPTMKRIFFVLKQN |
Secondary structure | LEEEEHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHLL |
PRMN | LLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLL |
PiMo | ooooooooTTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiii |