NONHSAT008537
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT008537 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
883 nt |
Genomic location |
chr1-:192549368..192550965 |
Exon number |
2 |
Exons |
192549368..192550034,192550750..192550965 |
Genome context |
|
Sequence |
000001 TGTTTTGATC TTCTGTCTAA AATCGAATGG TTTTTGGCAT TTTGTCAAGA GAAGAACCAG AGCATTTATT GTATGACTGG 000080
000081 TGAGTGTGTT AGACAGTTGC ACTGCTTGCT CCTCACAGTC TTGAAGGCCT GGACTATAAT TAATGTGACA GTCCTTGGAa 000160 000161 actgcttggg aagctgaggc aggggtatca cttgagcctg ggaggttgag gctgcaCTTA CCATTGCTGT GTGCCTGATG 000240 000241 ACTGGACCAG TCCATAGTGA GATTATCCAT ACATTAACCG TATTTCATTG TGATATGTGA GTGACTGATT ATTGAATAAA 000320 000321 ATATAAAGCA CAGGTGCGCG GGGAGATAAG AGCTGTACAG GCTATTCAGG AATATGCATC ATCTTGATGA TTTTTCTTCT 000400 000401 CTCTGTAGGT GAGCCCTACT TTGGAGTCTT TTTTCCTGCT TAGGTGACAC TTAGGACTGT TGCAGACTTT AGTGATTCAG 000480 000481 GAAATGCCTT CTGATCAGTG GGTGGCAGTG TTACATAGAG GAAGGAGAAT AGGTTGTAGT AGGAAGACTT CTGGGCAATC 000560 000561 CCTGCTAGTA TGACTGTCCC TTAATTCCCA GGTTCTGAAC TCTGAATTAT AAAATcatct tcagactcac ttggggcttt 000640 000641 cttttaaata tagattccca tatgctaccc tttggagatt tggttcagtc attctggtat gggaccccaa aacagggata 000720 000721 tgtgtgtgtt tttttaacat tctagataat tttgagagtt acctaaaatt aagaactagt gacttaatct ttctgagtct 000800 000801 cagctttcAT AGGATTGCTA TGAATGTTAA ATGAGAAAAT ATGTCTAGAT TTTATGAACT TTAACTCACA ATAAAATATA 000880 000881 TGC |
Predicted Small Protein
Name | NONHSAT008537_smProtein_26:82 |
Length | 19 |
Molecular weight | 2234.5278 |
Aromaticity | 0.166666666667 |
Instability index | 73.5611111111 |
Isoelectric point | 4.39630126953 |
Runs | 5 |
Runs residual | 0.0116959064327 |
Runs probability | 0.0335806394631 |
Amino acid sequence | MVFGILSREEPEHLLYDW |
Secondary structure | LEEEELLLLLHHHHLLLL |
PRMN | - |
PiMo | - |