NONHSAT008600
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT008600 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
635 nt |
Genomic location |
chr1+:196788893..196797376 |
Exon number |
5 |
Exons |
196788893..196789032,196794607..196794801,196795959..196796135,196797200..196797225,196797280..196797376 |
Genome context |
|
Sequence |
000001 ATAACTGTTA ATGAAAGCAG ATTCAAAGCA ACACCACCAC CACTGAAGTA TTTTTAGTTA TATAAGATTG GAACTACCAA 000080
000081 GCATGTGGCT CCTGGTCAGT GTAATTCTAA TCTCACGGAT ATCCTCTGTT GGGGGAGAAG CAACATTTTG TGATTTTCCA 000160 000161 AAAATAAACC ATGGAATTCT ATATGATGAA GAAAAATATA AGCCATTTTC CCAGGTTCCT ACAGGGGAAG TTTTCTATTA 000240 000241 CTCCTGTGAA TATAATTTTG TGTCTCCTTC AAAATCATTT TGGACTCGCA TAACATGCAC AGAAGAAGGA TGGTCACCAA 000320 000321 CACCAAAGTG TCTCAGACTG TGTTTCTTTC CTTTTGTGGA AAATGGTCAT TCTGAATCTT CAGGACAAAC ACATCTGGAA 000400 000401 GGTGATACTG TGCAAATTAT TTGCAACACA GGATACAGAC TTCAAAACAA TGAGAACAAC ATTTCATGTG TAGAACGGGG 000480 000481 CTGGTCCACC CCTCCCAAAT GCAGGTCCAC TGACACTTCC TGTGTGAATC CGCCCACAAG AGTACGTTAT GAATGTAGGA 000560 000561 GCCCTTATGA AATGTTTGGG GATGAAGAAG TGATGTGTTT AAATGGAAAC TGGACAGAAC CACCTCAATG CAAAG |
Predicted Small Protein
Name | NONHSAT008600_smProtein_170:292 |
Length | 41 |
Molecular weight | 4728.6686 |
Aromaticity | 0.15 |
Instability index | 76.50275 |
Isoelectric point | 9.62664794922 |
Runs | 9 |
Runs residual | 0.0469758064516 |
Runs probability | 0.02760603741 |
Amino acid sequence | MEFYMMKKNISHFPRFLQGKFSITPVNIILCLLQNHFGLA |
Secondary structure | LEEEEELLLLLLLLHHHLLLEEELHHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |