NONHSAT008600

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT008600

Source

NONCODE4.0

Same with

,

Classification

sense

Length

635 nt

Genomic location

chr1+:196788893..196797376

Exon number

5

Exons

196788893..196789032,196794607..196794801,196795959..196796135,196797200..196797225,196797280..196797376

Genome context

Sequence
000001 ATAACTGTTA ATGAAAGCAG ATTCAAAGCA ACACCACCAC CACTGAAGTA TTTTTAGTTA TATAAGATTG GAACTACCAA 000080
000081 GCATGTGGCT CCTGGTCAGT GTAATTCTAA TCTCACGGAT ATCCTCTGTT GGGGGAGAAG CAACATTTTG TGATTTTCCA 000160
000161 AAAATAAACC ATGGAATTCT ATATGATGAA GAAAAATATA AGCCATTTTC CCAGGTTCCT ACAGGGGAAG TTTTCTATTA 000240
000241 CTCCTGTGAA TATAATTTTG TGTCTCCTTC AAAATCATTT TGGACTCGCA TAACATGCAC AGAAGAAGGA TGGTCACCAA 000320
000321 CACCAAAGTG TCTCAGACTG TGTTTCTTTC CTTTTGTGGA AAATGGTCAT TCTGAATCTT CAGGACAAAC ACATCTGGAA 000400
000401 GGTGATACTG TGCAAATTAT TTGCAACACA GGATACAGAC TTCAAAACAA TGAGAACAAC ATTTCATGTG TAGAACGGGG 000480
000481 CTGGTCCACC CCTCCCAAAT GCAGGTCCAC TGACACTTCC TGTGTGAATC CGCCCACAAG AGTACGTTAT GAATGTAGGA 000560
000561 GCCCTTATGA AATGTTTGGG GATGAAGAAG TGATGTGTTT AAATGGAAAC TGGACAGAAC CACCTCAATG CAAAG
[back to top]

Predicted Small Protein

Name NONHSAT008600_smProtein_170:292
Length 41
Molecular weight 4728.6686
Aromaticity 0.15
Instability index 76.50275
Isoelectric point 9.62664794922
Runs 9
Runs residual 0.0469758064516
Runs probability 0.02760603741
Amino acid sequence MEFYMMKKNISHFPRFLQGKFSITPVNIILCLLQNHFGLA
Secondary structure LEEEEELLLLLLLLHHHLLLEEELHHHHHHHHHHHHLLLL
PRMN -
PiMo -