NONHSAT008627

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Basic Information

Transcript ID

NONHSAT008627

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2269 nt

Genomic location

chr1-:197473881..197476148

Exon number

2

Exons

197473881..197475058,197475064..197476148

Genome context

Sequence
000001 TTTCTCAATT ATTATGCTAA GTATATTATG CTGCTAAGAT ACCCACATTT AAGGGGCAGA TTTAGAGACT CTTTTAGAAA 000080
000081 CTGAGTGTCT TTATCTTATT ATCAGATAAC CAGGCTGCAC AGGGCTCTCT ATAATGGAAT GATGCTCCTT TTCAATACTT 000160
000161 AGAGCCACTG TACTCAGTTT AGGAGTAACT GAAGGTGTGG ATGCATGTTA ATGGGAATCC AATTTTTACT ATTTTTATAT 000240
000241 TAATAACAGC GTTCTGTAGA AACAGTCTCT CCCTTCTAAA TAAAAACTAT GTGACTGCTG TTACTAGTGC TATTCTATGC 000320
000321 GAATATCCTA ATAATAGGAT TCAGGAATTC TAATGAATTG TTTCTTAATT AAGGTGAACA AGTAGACTCC TGATCAAGAG 000400
000401 GAGAACACTG TGAATGTCTC ATAATCAATA GACCTTCATT CTCTTGTAGA AAATGTGGAT TTTCAGGAAA AGACTGATTA 000480
000481 TTTTCATGAA TAAATTTTCT TATACAAATT CCATTTTGTT TGACATAAAA GACCCTGAAT CTTAAGATAT TTGTAAATCA 000560
000561 GAATATTTAA GAATGTAAAA TGAATCCCCA AATCTAGTTT CCTCCAAAGC ACTTCTTAAT GTAGGAAATA GTTTTTACAA 000640
000641 ACCCTATGTC AGTACTAATG TTCCTGGGTC AAACCCAGTA ATATTGTTAG TGTATGTTGT TACACCTTAT TTAAGAGGCA 000720
000721 GAGTGGTTTT GAGCAAGTCA GTTAACGTGA TTTGATGAAG AAATAAGGAA TTATATACAT TTAGACAGAA GAATATTTTA 000800
000801 TTTTGAAAAT AGGATTTCGT GCAATAATTT TTCTTGCATA ACTTAGTTCA TATAAATATG TACATCTGTT TTTCTGGCAG 000880
000881 ATGCCTTAAG GTCATGTTTT TCAGTATTTG AGTAAATCTG TATGTAGCAA TGTTCTCATT GATTTCAGAA AAAAAATATA 000960
000961 TTCTTTATAT TGTTGCCAGG AGAAATGTTT TTGTTTATTT AAAATTATTA TGGATATTGT GTTGTTGTAT CATAACTAAC 001040
001041 TGCCTCAGCA ACAATAAATA TGCAGTAAGA AAATCCTGTA CCTTAGATTG ACAATACTGT TACTTTAAAA GAAATATATA 001120
001121 CGGTACAAAT TGCTGATTCT ACATGTGTAC ATTTAACAGA TACTCAGTTC TGCACCACCT AAATCAAAAT GGCATTTGTA 001200
001201 TGCTGATGAT TACATATGTG GATTGTAGTA TCCTTTGTGA TGAATCTTTG ATAAGATTTA TAAAGGGCAT TGCCAATACT 001280
001281 TTTTGACTGT GTAAATTAAG TTAATTTTTT GTATGATGTA CAGTTTGTTT AACCTTAGAG CTTCTATAGA TTTCTACTTT 001360
001361 ATTATACTTG AATGAGGCAG AAAAGCACTG TGGAAAATCT GTAGCTCTGG ATGCAACATG CAGACATACC AAAAAAATAA 001440
001441 TAATAAAGCA AGGTACTGAA GAGCAATGTT AACAGAATGC TTTATATCCA GAATGCTATG TTTTTTTCAA GCCACATTTT 001520
001521 AGTTGAATGA AGTAAAGTTA TTCAATCTTT TATTTTAAAA TATTGGAAAG TCACAAATGA TTACCTCTTT GATATGATGA 001600
001601 ACCTATAAGT CTATTCATCT CTGTTATTTC ATTTCTCAAA TGTGAGCCTT GTTGAGGTCC ATTATCAAAT CTACACTTTG 001680
001681 GTTGATTATA TGATGTTTAG GACAAGGCAG AATTTAAAAC CTGCATGTTT AGTGCATCAC ATGTCAAGTC ACCATCCTTC 001760
001761 TGACAGTGTA ACTTCCATAA CGTTATTTTG AGAGCCATTT AATAATCATA TTTGAAAAAG TGGATTTCTT GAGTCTGTTG 001840
001841 TAGTTTAGTA CTTACAGCAG TGCCTAAAAC AGCAACTAAT ATGAACTGCC TGAGTCCTAC AACATAAATG CATAAAGCTT 001920
001921 TTTTATGTAA AAGCCACAGG AGGGGTTCAA AATTGAACTT TTCCAAAGTT TATTTCTCTT GCGTTAGATG AAAAACTATT 002000
002001 TAAAAGGACT GAAAACCCTG AGCTTTTTGC TCGTCTTGGT AGCAGATATC TGTAAAAACC TACCCAGAAT TGTGATTTTA 002080
002081 CTTCATTGTT CTTGCATCCT TGAGGCTACA GTATAAATCA TCTCCAAACT TGACTACTAT TGGGAAGATG TGTATAAAAG 002160
002161 CATCGCTTTG GGAATTTTTT AAAAAATATG CAAAAATAAA TATTGAATAA AATCTACATT ACCATAAAAC ACCCAAAAAT 002240
002241 GCAGTTCTAA AATAAAATTG GTCACAATT
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Predicted Small Protein

Name NONHSAT008627_smProtein_929:1090
Length 54
Molecular weight 6281.6097
Aromaticity 0.132075471698
Instability index 53.5811320755
Isoelectric point 9.33111572266
Runs 6
Runs residual 0.0470547630005
Runs probability 0.0411440852617
Amino acid sequence MFSLISEKKYILYIVARRNVFVYLKLLWILCCCIITNCLSNNKYAVRKSCTLD
Secondary structure LLLLLLLLEEEEEEHHHHHHHHHHHHHHHHHHHHHHHLLLLLLHHHHHHLLLL
PRMN LLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTooooooooooooooo