NONHSAT008665

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT008665

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1906 nt

Genomic location

chr1+:198867859..198875694

Exon number

2

Exons

198867859..198869739,198875670..198875694

Genome context

Sequence
000001 GATTTATTAG AAATTCAAGT AAGTTTTGCT ATACGAATAA TACACTCAGG CAATTCAATA TATATTCTTG CCTATGTTGA 000080
000081 ATGATGGACG GTTACATTTT ACTGTGTATA TATTTTGATG ATTATATTTC TTCTCAAACA GTCCTAACCA GTTTCTGAGA 000160
000161 AAGTATTTTC TTTGCCTAAA TATATGCAAA ACTATAATTA AGCCAACAGC ACTTATAGac aagctgaatg gcttaggaca 000240
000241 gttgattttt tgtgcatcat tttcttcatc tgaatatgag agttgtatat acagtttcta tactttctac cagctctgag 000320
000321 attctgttaa ttctaATGAA AAATAAGAAT AAAGACAAAT TATACATTGA AATTCTCAAG ATCATAGTGA ATATTATGCA 000400
000401 AGGTAGACAG GTACCTACAT TTATCATTTT GTTGGTGATC CTGCTTCTAT CAAAATTCAT GCCACAAATT ACTTCATCTA 000480
000481 CAAATATTCC TGACACCCAT AGAGCACAAC ACATTAAAAA ATGGACTAGT GGACTGGGGA GGCCCTTCTG AGATGCACTG 000560
000561 TCTCCTTTCT AAACATACTC TATTTTCTGG GGACATCCAG CATGGAACAG TAGTCAGAGG CCAAGAACTA CAGTAAAAAA 000640
000641 AGGGGGTGGG AAAAGGGGAA TGAGAGGAAG GAAAGTAAAA TATAGAATTG TCAAAGAGGT AAAATCAAGT GGAAAGTGTG 000720
000721 GGGACACAGG AATGGGGCGG GGAATAGAAA CCAACTGGGA AATGGATTCA GCGAGAACTA CCTACAGCAC ATCTTCAAAA 000800
000801 CTGGGAGCCT GATTCACTGT CAGACGCAGA AGTGTCTTCT TCCCAGACTC TGAGCTCCAG TAGCCACATC TTTAAATTGC 000880
000881 CTGACTCCAA CAGCTGATTT GGTTGCCACC ACATAAATAG AAATTATAGC TTTCAACCCT TCATTTTATC TCTCTTACCT 000960
000961 ATAATCCTCT AGTTCCAGTC TGTCTGACCA CTTGACAAAG GTTTCTTCGT TTTTGTTTTG TTTTGTTTCA ACATTAGTGC 001040
001041 AGCATTGGGG GAACACTTAA ATACGTTTTA CACATAGAGA ACAGTAGACA GCCCTGGAAA CCCTAGACGA GAAAAGATAT 001120
001121 ATCCTGCTGG GAACATAAAA TGGCGCACAG GACACACACT AATGATTCTT GTAATTGAGA TTGTCATGTG TCTTATTAAA 001200
001201 AGCCATCATT TACCTGGAGG TCTTTCTTGA AAAAAAATGC AAAGATGCTT TACAGATTTT ACTTAAGAAT GTTTCTCAAA 001280
001281 GCCTTACTGA TCTATTTTCA TAGGTATGTT GTTTGGTTAG GTCCTTCAAA GGGCTTCAAG GTTTACTTTT ATATTTAAAA 001360
001361 AGAGTGAAGA TGAAAGCTAT TATTTGAATA CAGCATTGCA TTCAGTGGCA CCAAGATGCT TATTACAAGT GCCCCGATGA 001440
001441 GACAGTCGAA GCGTCTCATG GAAGCCAGTC TCCTCTAATG TGTATTTTGG TGCCCTGTCT GCTGGTTCGC CTAAGTGATG 001520
001521 TGGCATACAT TTGATGAAAG GACAGTAAAT GACATCAATT ATAAAAGACA TCTACTAATG AGAGGAAGAA GAGGAAGAGA 001600
001601 GAGAAATTGA AAAAAAGAAT AAGAAATTCT CTGAAATGGA AACAGCAAAG CACTTTGATT GAACTAAAAG AAATGACGTA 001680
001681 CCTTAATCAT GCCCTAATTT TAGGGTACCA CCAACCAAGC TACTCACTCT TCTTTGGAAA GATGACGTGT TTCTTCAACT 001760
001761 TCTGTACAAC TGTCATTGAA GATTTAAATC AATCTCCCTT CAGTTTCCAT CATTGATTGT TGGTAATTTT GCCAGGATCT 001840
001841 CTGTACAAAA CAAAACAAAA AGATATTATG TGAAACTCAG GCTGGTAGGA ATAAAATCTC TCCTCC
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Predicted Small Protein

Name NONHSAT008665_smProtein_275:550
Length 92
Molecular weight 10450.5287
Aromaticity 0.0659340659341
Instability index 58.5120879121
Isoelectric point 10.3501586914
Runs 11
Runs residual 0.0125915750916
Runs probability 0.0875206757559
Amino acid sequence MRVVYTVSILSTSSEILLILMKNKNKDKLYIEILKIIVNIMQGRQVPTFIILLVILLLSK
FMPQITSSTNIPDTHRAQHIKKWTSGLGRPF
Secondary structure LEEEEEEEEELLLHHHHHHHHHLLLLLLLHHHHHHHHHHHHLLLLLHHHHHHHHHHHHHH
HLLLLLLLLLLLLLHHHHHHHHHHHLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHH
LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTT
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