NONHSAT008733
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT008733 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
848 nt |
Genomic location |
chr1-:201324543..201325828 |
Exon number |
3 |
Exons |
201324543..201324902,201325078..201325139,201325403..201325828 |
Genome context |
|
Sequence |
000001 ctccgtctca aaaaaaaaat tagctgggca tggtggcgcg tgcctgtagt agggctcggg aggctgaggc aggggaatcg 000080
000081 cTCAAAAAAA AAAAACAACT GTGCCCAGAG GTGGGCACAG AAGACACCCT TGCCCTCCGA CTCTGAAAAG CCCCTAAGAC 000160 000161 CAGATCCCAC TTAATCTCTT TTCTCCTAAG GTCACCTGGT GTTCAGGAAA GAACTTCGGA GTGTCCCAGG CGCTGCCCCC 000240 000241 ATGGGGGCCT CACCCAGTTG AGGTCCCCAT CCCATCATCT TAAGAGGAAC ACCACAGGTT AACCCAAGCG CTGCCTCTAG 000320 000321 GCAGGAGATC TGCAGACACC TGGTCTGCAT GGAACCTGGA GCACTAATCC ATAAGTGGAG CCTGGGAAGG GGACCTTGTC 000400 000401 CTATCCCAGG ACAGAGGAGA AAGCAAGTGC AGCAGTGGCC AAGAGCTGTC CTGGGCCTCC TGACAACTGA GGAGCTGGAT 000480 000481 GCAGCGGGGC TCTTCTCAGC CCTGAGTCAG AGGTGAAGAC TCTTCCGCCA TCCTGTCATC AGATTCGTTC TCCTAACAAG 000560 000561 CTCGCATCCT GGGCAGAGCT TGTTCGTGTG ATGCCCACTT TAGAGGTAGA GCTGGGAGAG AACAAGGTGT TCCCCCAGGG 000640 000641 CTCCTTCGCC TGGGAATCCA GCTCCTCCAG CTGGAGCCCC GATGCTCTGA AGctagagcc tcactttctc ccatcaaact 000720 000721 ctggctctgc cccttcccag ctctgggatt ttggtcaaat tccttgcctt ctctgtgctg aagttcccct atctaaacaa 000800 000801 tggggattgt tatgaaggct aaatgaaata aacatgcagc aactagca |
Predicted Small Protein
Name | NONHSAT008733_smProtein_590:814 |
Length | 75 |
Molecular weight | 8104.0743 |
Aromaticity | 0.108108108108 |
Instability index | 59.6662162162 |
Isoelectric point | 4.37591552734 |
Runs | 11 |
Runs residual | 0.00599868160844 |
Runs probability | 0.0468275762395 |
Amino acid sequence | MPTLEVELGENKVFPQGSFAWESSSSSWSPDALKLEPHFLPSNSGSAPSQLWDFGQIPCL LCAEVPLSKQWGLL |
Secondary structure | LLEEEEELLLLEEELLLLEEEELLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHLLLLLLE EEEELLLLLLLLLL |
PRMN | - |
PiMo | - |