NONHSAT008797
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT008797 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
972 nt |
Genomic location |
chr1+:202101763..202102716 |
Exon number |
1 |
Exons |
202101763..202102716 |
Genome context |
|
Sequence |
000001 TGAAGGAGAG GCCGAGGGAG GTGGAGCGGG AGGAGGTGGG GCTTACTGTG AAACTGGGTC AAGATGGCCT CGGATTTGAG 000080
000081 CAGGCAGGGT CACCAGGCTC TGAGGCAGCA GCTGTGAGCA GTGCCGAGGG AGGACCAGCT CTGACGGTGA GGTCGGGTGG 000160 000161 GGGACTAGAA TCCAGCAGAG GAGCGAGGGC AGGGCTCCTA CCAGGAAACC CATAGCATTG ACACTAACTG AGAGGCAGCA 000240 000241 AAGGCGGTGA CACTCCCCCA GGCTCTGTGG GCCCAGCCCT ACCCCTGAAG CACAGTTAAC TGGTTCTGGG GTAGGAACTG 000320 000321 GGGGCCGGAG GGACAGGGTT CTGGTTCTGG CTCAACCTTG GCTGCTGGTG AGATCCAGGG CCTGGGAAAG AGGGGCTGAG 000400 000401 GCCTGAACTG GGCCTAAGGA GAGTGCAGCT CAGTTCGCAC ACAACAGCAC CCAGCCCTGT CCCCTTGCTG CCTCTACCCA 000480 000481 GCCCTGGGCA GTTCCCTCAA CAGAGCTCTG CAGCCCCAAG TGGCAGCTGC TGGCTCAAAG CTGGGACTAC ATGAAAGTCT 000560 000561 GAAAAGAGAA TGAGAAGGAG GTGGCGCAAG AGCCTGGACG CACGTGTGGG AGGCCGTTTT GTGCAGCGCC ATTGTGCTCC 000640 000641 CCGGGCGGGC ATGTGCTCGC GCTCCGTGGC TCTGTTGGTG CCCAGCGTGC GGGGGTGTGC TGGTGGCCCT GTGGGCCTGT 000720 000721 AGGGCAACCC ATGCCAACTG CGGAAAAGTA ACCAGCACCA TACACCCCCC CCAACACAAA ACTGGTCATT TATTTTTTTT 000800 000801 GTTGTCATTG TTATTAGGAA GCAAAAAAAT GTACAGTTAC AAGAATCATT TTCCAAACAG AGGTTAAATA TGAGCTGAAA 000880 000881 AGTGTAAAAA AGGAAGAGGA ACATCACTTT ACAAATCATT AAATTAAACA AATAAACAAA CAGAACCCAA AGAAAAAAAA 000960 000961 AAAAAAAAAA AA |
Predicted Small Protein
Name | NONHSAT008797_smProtein_569:721 |
Length | 51 |
Molecular weight | 5435.4247 |
Aromaticity | 0.04 |
Instability index | 72.894 |
Isoelectric point | 12.0022583008 |
Runs | 9 |
Runs residual | 0.0153216374269 |
Runs probability | 0.041620051424 |
Amino acid sequence | MRRRWRKSLDARVGGRFVQRHCAPRAGMCSRSVALLVPSVRGCAGGPVGL |
Secondary structure | LLLHHHHHLLLLLLLLEEELLLLLLLLEEELEEEEEELLLLLLLLLLLLL |
PRMN | - |
PiMo | - |