NONHSAT008801
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT008801 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1061 nt |
Genomic location |
chr1-:202127586..202129736 |
Exon number |
2 |
Exons |
202127586..202128582,202129673..202129736 |
Genome context |
|
Sequence |
000001 AAagacagac cgacagacag acagacagCT GGCAAGAGGC AGCCTGGGGG CCACAGCTGC TTCAGCAGAC CTCATGGCTG 000080
000081 AGTGAGCCTC CCCTGGGCCC AGCACCCCAC CTCAGCATGG TCCAAGCCCA TGGGGGGCGC TCCAGAGCAC AGCCGTTGAC 000160 000161 CTTGTCTTTG GGGGCAGCCA TGACCCAGCC TCCGCCTGAA AAAACGCCAG CCAAGAAGCA TGTGCGACTG CAGGAGAGGT 000240 000241 GAGATCTTCC CTGGGGGAGG GGTCTTCCGA GCCCTGAGCC CCCATTCCGC TCCTCCCTTC CTTCCATCTG CCCCTCCAGC 000320 000321 TCTGACAGCA GGGTCCAGAG GGCCCTCAGT TGTTGACTCC AATTTGGAAA GGAAACCAGT AGTGCTCATT TGCATGTCTT 000400 000401 TTGCATGTCT GGAGCACAGA GTTTCATATC AACCATGAGC CTGCTCCCTA AATTCCAGGC AAGGCCCACA GCCTTCTTGG 000480 000481 TGCTGGATGC ATGTCGGAGC CACAGGGCCT GGCTGGGAGT GGGAAGAGGC AGGCAGCTGG AAGGAGCAGT TGAGTTCAAG 000560 000561 GCTGCCCTGT TCTGGCTGAC AAAGGGAGAG GGCTGAgcca ggcatggtag ctcatgccca aaatcccagc actttgggag 000640 000641 gctgaggtga gaggatctcc tgagtccagg aattagagac cggcctaggc aatatagtga gacctcctct ctctcaaaaa 000720 000721 aaaaaaaaaa aAGAGGGCAC ACAGCAGGGG CCCAAACCCT AAATTTACTG GGCTACCAGG TTAAAGGAAA GATAAAGAGC 000800 000801 GGCCCCCTCA GAGGTGCCTT ATAACAGTAA TACTTGTAAG AAAAGCAAAT ATggtcaggc acagtggctc atgcctataa 000880 000881 tcccagcact ttgggaagcc aaggcagaag gatcacttga gcccaggagt tcaaaaccag cctgagcaac agaacaagac 000960 000961 actgtctctc caaaaaaaaa aaaaacttaa attagccagg tgtggtagca tgtacctgtg gtcccagtta ctctggaggc 001040 001041 tgaggtggga ggattgcttc a |
Predicted Small Protein
Name | NONHSAT008801_smProtein_404:595 |
Length | 64 |
Molecular weight | 6897.963 |
Aromaticity | 0.111111111111 |
Instability index | 47.4825396825 |
Isoelectric point | 10.2744750977 |
Runs | 9 |
Runs residual | 0.00210560414642 |
Runs probability | 0.0483228326366 |
Amino acid sequence | MSGAQSFISTMSLLPKFQARPTAFLVLDACRSHRAWLGVGRGRQLEGAVEFKAALFWLTK GEG |
Secondary structure | LLLHHHHHHHHLLLLLLLLLLHHHEEHHHHHHHHHHHLLLLLLLHHHHHHHHHHHHHHHH LLL |
PRMN | - |
PiMo | - |