NONHSAT008885
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT008885 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
717 nt |
Genomic location |
chr1-:203310465..203320216 |
Exon number |
3 |
Exons |
203310465..203310957,203311455..203311622,203320161..203320216 |
Genome context |
|
Sequence |
000001 AACCCAAGGA GGCCAGACAG AGGGACGTGG TCACTCTCTG AAAAGTTCAA CTTGAGAGTT CTCCATCAGC AGCTTCTGCA 000080
000081 CCGTGGTGGA CGTCGTGAAC TTCTCCAAGC TGCAGGTGCT GCGCCTGGAC GGGAACGAGA TCAAGCGCAG CGCCATGCCT 000160 000161 GCCGACGCGC CCCTCTGCCT GCGCCTTGCC AGCCTCATCG AGATCTGAGC AGCCCTGGCA CCGGATGCCT CTTCTGTGCC 000240 000241 TTAAGCAGAG TCAGGAGACC CCAAGGCATG TGAGCATCTG CCCAGCAACC TGTGGAGACA ACCCACACTG TGTCTGAGGG 000320 000321 TGAAAGGACA CCAGGAGTCA CTTCTATACC TCCCTAACCT CACCCCTGGA AAGCCACCAG ATTGGAGGTC ACCAGCATGA 000400 000401 TGATAATATT CATGACCTGA TGTGGGAGGA GACAGCCAAC CTCAGGCTTA GATCAATGTA TAGGGCTATA TTTTGGCAGC 000480 000481 TGGGTAGCTC TTTGAAGGTG GATAAGACTT CAGAAGAGGA AAGGCCAGAC TTTGCTTACC ATCAGCATCT GCAATGGGCC 000560 000561 AAACACACCT CAAATTGGCT GAGTTGAGAA AGCAGCCCCA GTAGTTCCAT TCTTGCCCAG CACTTTCTGC ATTCCAAACA 000640 000641 GCATCCTACC TGGGTTTTTA TCCACAAAGG TAGCGGCCAC ATGGTTTTTA AAGTATGAGA AACACAGTTT GTCCTCT |
Predicted Small Protein
Name | NONHSAT008885_smProtein_419:586 |
Length | 56 |
Molecular weight | 6710.4439 |
Aromaticity | 0.145454545455 |
Instability index | 48.6490909091 |
Isoelectric point | 6.82208251953 |
Runs | 7 |
Runs residual | 0.0242424242424 |
Runs probability | 0.0383829207359 |
Amino acid sequence | MWEETANLRLRSMYRAIFWQLGSSLKVDKTSEEERPDFAYHQHLQWAKHTSNWLS |
Secondary structure | LHHHHHHHHHHHHHHHHHHHHLLLLEELLLLLLLLLLHHHHHHHHHHHHHLLLLL |
PRMN | - |
PiMo | - |