NONHSAT008967
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT008967 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
552 nt |
Genomic location |
chr1+:204628566..204632020 |
Exon number |
3 |
Exons |
204628566..204628592,204631228..204631285,204631554..204632020 |
Genome context |
|
Sequence |
000001 CCAGCTCAGA GGAGGAGGAG GGAGAGGCAG GCACCTTCTG TCCAACAGGA AGAAGGAACC CAAGACTGAA GACCCACAGC 000080
000081 TAAAGatgat gaaactaaga ctaagagaag ttcaccaact tgtccaaggc cacaactcac agtggaatct gaactcggct 000160 000161 ccatatgact cgagtcccac gatcttttca tgttccctgc tacctctcCC TCTCAGCCTG CTACAGTGAT GGGACAttta 000240 000241 tgaacttgca aaatgctttc tcacaaatga tcttatttga ttttcacaaa catgtgtgag gcaggtataa gttctgttct 000320 000321 atggatgaac aattggtctt caggtaaaga acaacttgtc caaggtcaaa tagctgataa gtatctggga actgggacct 000400 000401 aaatacacat ttGATGAGTA ACTTTGCCAC AATATCTTAT CTGGACACTT GAAAACATAC TCCAGCCCTG TCATAAACCC 000480 000481 AGGAGAATTT GAAGATGTCC CTCCCTACTT ACAGCCTGGT TTCATGATCA CTAGAAACTT GTTTAACTAA AC |
Predicted Small Protein
Name | NONHSAT008967_smProtein_164:298 |
Length | 45 |
Molecular weight | 5140.9173 |
Aromaticity | 0.159090909091 |
Instability index | 57.9295454545 |
Isoelectric point | 7.86578369141 |
Runs | 5 |
Runs residual | 0.0494652406417 |
Runs probability | 0.024960254372 |
Amino acid sequence | MTRVPRSFHVPCYLSLSACYSDGTFMNLQNAFSQMILFDFHKHV |
Secondary structure | LLLLLLLLLLEEEEEEEEEELLLHHHHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |