NONHSAT009039
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT009039 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
629 nt |
Genomic location |
chr1+:206137237..206138150 |
Exon number |
2 |
Exons |
206137237..206137486,206137772..206138150 |
Genome context |
|
Sequence |
000001 CTGCGCGGAA CACCCATCCT CCTGGGTCCT AGGCTGGGAC CCGGGCTGTC CGCCAGGGCT GGGAGACACT GGAGGAGGCC 000080
000081 GGCCGATGAT TACGCGCGAT GCCAACGACG ACTGCCCTAC GGTGGACCGC GGCTGCCCGT GTGCGGAGGA AAGGGAGAGG 000160 000161 CGGCTGGGTG CCGGCTGCGC TGCGGTCCGT GAGCCAGGAC GGAGTCCCAG GCTGTACAGT GATGGGCGGA GAGACTCGCA 000240 000241 GTCCTGAGAA ATCGGTGCCC CAGTCCCTGG AGGAGCCTCC GCCAACTCCG CAGGACCCCG CCGGGAAGTA GAGCCCACCC 000320 000321 CTTTACCAAT CACCGCCCGT TTTCTATCGA CCGATGGGGC CCATAGCCAA TAGGAAGAGC TGATCCCGAG AGGCCCGGAA 000400 000401 TGAGGGGGAG GAGCTGGCAA AACTTGGAGG TGTGACTAGC ACTGCCGAGG CGTGGTCACA GATTAAGCTC CACCCCGGGT 000480 000481 TGTTGAACCC CTAAGTAGAA CTGATGGGCG GGATTAAGGT GGAACCGACG ACCAAACACA AACTCTTGAG CTAAGGCACG 000560 000561 GCCAATTGGG CCGGGGTAGA GAGGAGGGGT GTTGCGGGGA GTTTTAACCA ATAAAGAGTA GAGACCGGT |
Predicted Small Protein
Name | NONHSAT009039_smProtein_98:310 |
Length | 71 |
Molecular weight | 7367.2855 |
Aromaticity | 0.0285714285714 |
Instability index | 107.89 |
Isoelectric point | 10.2556762695 |
Runs | 11 |
Runs residual | 0.0123055162659 |
Runs probability | 0.045205633441 |
Amino acid sequence | MPTTTALRWTAAARVRRKGRGGWVPAALRSVSQDGVPGCTVMGGETRSPEKSVPQSLEEP PPTPQDPAGK |
Secondary structure | LLLLHHHHHHHHHHHHHLLLLLEELLEEEEELLLLLLLEEELLLEELLLLLLLLLLLLLL LLLLLLLLLL |
PRMN | - |
PiMo | - |