NONHSAT009146

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Basic Information

Transcript ID

NONHSAT009146

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2062 nt

Genomic location

chr1-:207974867..207996048

Exon number

5

Exons

207974867..207976007,207979350..207979442,207989274..207989425,207990584..207990759,207995549..207996048

Genome context

Sequence
000001 AGCTTTCTAA AATCTCTTTA GGGGTGTGCG TAGGCTCCTG TGTCTATGCC TGCTTTTGAC TGCCCAGTTG AAGCCTCTTC 000080
000081 CTATGCCTTT TAAAATTTCA CGCACTATAA GGAGGAAGAG CTCAGGGCTC CCAAAACTTT TTATTTAGAG GGAAGAATGC 000160
000161 TAGGGAGATG GGTATGCAGA GGGTTGACCA AATTGGAAGA AAATATTTAT TCTGTAGTTT GGTGTTGGAA AAGGGAATTT 000240
000241 TCCAATCAGC CACACCTCAG TGTTGCGGCA AAATAATTCT TGGCTCCCCT GGAAACGCAT GGGCAAGGTA GGGCAGAGCT 000320
000321 GCTGCTGCTG ATACTGCCAC CACCCTGGGC TTCCTGCTGA CTCTGGGCTA CTCCCTGGGG ACAACAGATT TGCATTGACG 000400
000401 TCCGGGGCTG TCCAGAGGCC CTCAAGAGCC AGTTGTGAGC TGAGCCCAGT ATGGGAAAGA TCTACCTTCT GGAAGCTACT 000480
000481 ACTACGTGGT GCTTGGAAAG AGGACTCAGG AGAGTGCAGC TTGCTCTGTG AGTGGGTGAC AACCTCTTGG CGACTCAGGC 000560
000561 TCAGCTGAGG ATGGTGCCAG TGTGCCGGAG ACAGCCGTCA TACTGCCGGA TAGAGTGGCT CACTTGCATG TATTTGGAAC 000640
000641 AAAAAAAGGA GATGCCTGGC AGCCCCGCTC TCTGCAGTGC TGTTGAGCCA CCAATTTTTG TGGTTTTGTG ACCACAAGTG 000720
000721 CTGACTGATG CGACATGACC CCAGTCTTGT CAGTGAATCA TCACCAGGCT GCTTACTGGA AACTGGATGC AGCAAGGAAA 000800
000801 TAGGATTTAA CCGCTCTCTG CCTCCCAGGA GCCCTGAAAT CAGCATTCCC AGAGGAAAGA AGATGGCCAT CTGGGCTTGG 000880
000881 CTTCCGGCTC CCCCCATCTG GCTGGAACAC ACATCAGTCA CCCCTGTGTA ACCTCCTCTG TGCCTTTCCC ATGGAGCACT 000960
000961 GTGTCATATC ACAAGTAGAA CTACAAGAAG ATATTTCTCC TCAGGGCAGA GGCTGGGTCT TCCGATTGAA TCTCCCTTCT 001040
001041 TTCTTCATTG AGATCCTCTT CTTCTGGAAG CTGGTTTCAC ATGGTGGCTT AGATTTTTCC ATCTTTGTAT CTAGCACCAT 001120
001121 TTGAAATCAG TGTTTTAGGA GTAAGAATTG CAGCACAGCC AAGGGTGGAC TGCAGAGGAA CTGCTGCTCA TGGAACTGGC 001200
001201 TCCTCTCCTC TTGCCACTTG AGTCTGTTCG AGAAGTCCAG GGAAGAACTT GAAGAGCAAA ATACACTCTT GAGTTTGTTG 001280
001281 GGTTTTGGGA GAGGTGACAG TAGAGAAGGG GGTTGTGTTT AAAATAAACA CAGTGGCTTG AGCAGGGGCA GAGGTTGTGA 001360
001361 TGCTATTTCT GTTGACTCCT AGCAGCCATC ACCAGCATGA ATGTGTTCGT AGGGCCTTTG AGTGTGGCGA TTGTCATATT 001440
001441 CTGTTGGATA ACAATGTATT GGGTGTCGAT TGTCATGGGG CAGGGGAGAG GGCAGTACAC CTGGAGGACC ATTTTGTCCA 001520
001521 CATCGACACC ATCAGTCTGC TCTTAGAGGA TGCCCTGGAG TATTCGGCGT TGATTGCGGG GCACCCGAAA TCAGACTTGC 001600
001601 CACCTGGACT GTCGAGGTGC AGACCCTGGG AGCACCACTG GCCCATCTCT TACACAGGCT GACCGATTTC TCCTGGTGTT 001680
001681 CAGAGTCTGT TTTTGTCTAG CACCATTTGA AATCGGTTAT GATGTAGGGG GAAAAGCAGC AGCCTCGAAG CCTCATGCCA 001760
001761 ACTCTGGGCA GCAGCAGCCT GTGGTTTCCT GGAAGATGGA TGGGCAGAGA ATAGGGAAGG AAGATCATGC TTTTCCCTAC 001840
001841 TAACTTCTGT AACTGCATGT ATGATACATT ATTGCAGAGG TAAGAGATAG TTTAATGGAT TTTTAAAAAC AAATTACTAT 001920
001921 AATTTATCTG ATGTTCTCTA GTTGCATTTT GCTGAAATGT AGTGCTGTTC TAAATTCTGT AAATTGATTG CTGTTGAATT 002000
002001 ATCTTTCTGT TGAGAAGAGT CTATTCATGC ATCCTGACCT TAATAAATAC TATGTTCAGT TT
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Predicted Small Protein

Name NONHSAT009146_smProtein_950:1123
Length 58
Molecular weight 6601.5607
Aromaticity 0.157894736842
Instability index 54.1228070175
Isoelectric point 4.96673583984
Runs 9
Runs residual 0.00394736842105
Runs probability 0.0499519126971
Amino acid sequence MEHCVISQVELQEDISPQGRGWVFRLNLPSFFIEILFFWKLVSHGGLDFSIFVSSTI
Secondary structure LEEEEEEEEEEELLLLLLLLEEEEEELLLHHHHHHHHHHHHHHLLLLLEEEEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLL
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