NONHSAT009261
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT009261 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1502 nt |
Genomic location |
chr1+:210465691..210467192 |
Exon number |
1 |
Exons |
210465691..210467192 |
Genome context |
|
Sequence |
000001 AGACAAAGAG GCCTGTTCCC GAGGTGTCCG ACCTCCTGCC CCCTTGGCGG GCCCCGCCCG GGTTCCTCCA GCAGGAATCG 000080
000081 CCCCAGGCGC TGGGAGCCAG AGCTGGCCGG GTCTGACACC CGCCCCAGAC TTTCCACGAT CAGGTTTCAG CTCGACTAAC 000160 000161 GAGGGGGAAA GAAAGAACGC GCGACTTccg cgggccggag ccgcgcgggg gcccgggggA AACGCCGGCC TGGTCTGGGT 000240 000241 GGGAGGGGAC GCGAAGAGGC TCCGGGCTCG GCCAGTGTCT GCCCCGGGAC TGGGCCCTGG GACTAGGCGG GGCACAGGTG 000320 000321 TCCCAGGAGG GGGCGCCCTG ACTTGACGCG AACGGGCCAC CTGTCCCTCC CACGCCTGCG CTGCCACCCG CCCTGCTCCG 000400 000401 CCATCGCCTC CTCCAAAGCT CCCCGGATCC TCCGAGGCGT CGTCGTCCGA GTTGTTCTGC GGGAGGAACT TCTGCTAAAG 000480 000481 CCGGTCCTCG AGTCCCCCCC GCCTCAGGAG GGGCAGCGCC CGGATTGTCT TAAGTACAAC ACTTGCCAAA AGGGGCTCTT 000560 000561 TGGGATTTGG GACTTTTTTT CCTAAGCAAC AGACGTACCT TTCCAGACTC ACCAACTTAG AAGCACAGGT TTTCTGTTTG 000640 000641 TTTCATTATT Agactttcaa agatcatcat gtcccacagc ctcctccttt tccagatgag gggactgaaa atcagaaaca 000720 000721 ttttgccttt tgctcaaggt cacacagctc aagttcactg ggcggctggg actagaGGGT CCGAATATTC TGCAGCTATG 000800 000801 ATATGAAAAA AATAAGTTTG GCTGGAGGGT GGAGGGCATC CAGGTCTGTC CTGGCCAGCC GGCGGGGAGG CTCAGCCCAG 000880 000881 GGTTCAGATT TTCCTGGAGC CAGTCCACCA GCGGTCAGGC CACATGTGAG TAATGAAGAA TTGAGTGTTG TGTACTTTAG 000960 000961 GCTGGTCTCC CTCTTCCTGG CCCCCTTCCC CGGCCTTAAC TTCCTTTTGG AGTCCCTACT GACTTCTGGG TGTCCACCAT 001040 001041 GGGCCCTGTT GGAAAAATTT CAGCTCCATC CCAGAATAAA AGGAATGAAA ACCTGGGGAA AGGAGCCAAG AAGGAAAAGC 001120 001121 CACAAATTCG CATCTGGCCG AGGCAGAGGG AGCAGCTCCA AGAGCCTGCA GAAATGCACT GTGACTGCTG TTTGCAGAGG 001200 001201 TTCAGCTGCC AGAGGCTCGG ATGCCCTCCT GGGTCCTGCT CCTGAGAAAT CAGAGCAGGC AAGAGAGAAG ACACATGTTC 001280 001281 CCCACCAAAT TTTTCCTGCC GCCAAGTCCT TCAGGTTTCT GCAGACCATG gggaagaaca agaactatgg agtcaggcaa 001360 001361 gaggtagctg gaattccaac tccccaaccc attagatggg gccttgagta agtgactcaa cctctctaag cctcagtttc 001440 001441 tttgcctgtt acatgagggg aacaacagga ccattatgag gacttatata acgtgtacta ta |
Predicted Small Protein
Name | NONHSAT009261_smProtein_1220:1366 |
Length | 49 |
Molecular weight | 5791.7244 |
Aromaticity | 0.125 |
Instability index | 102.84375 |
Isoelectric point | 12.0044555664 |
Runs | 9 |
Runs residual | 0.0219298245614 |
Runs probability | 0.0405797954817 |
Amino acid sequence | MPSWVLLLRNQSRQERRHMFPTKFFLPPSPSGFCRPWGRTRTMESGKR |
Secondary structure | LLEEEEEEELLLHHHHHHLLLLLLELLLLLLLLLLLLLLEEELLLLLL |
PRMN | - |
PiMo | - |