NONHSAT009292
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT009292 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1005 nt |
Genomic location |
chr1+:211556162..211605911 |
Exon number |
7 |
Exons |
211556162..211556267,211564958..211565039,211565169..211565318,211570109..211570173,211572502..211572779,211599553..211599625,211605661..211605911 |
Genome context |
|
Sequence |
000001 GTCGGGCGTT GGGTTTCGCG GCGCTCGCCG CACTGGTTGT TCAGCACCTT CGGTCCGGTT GAGGTTGTCA AGTCGGACCA 000080
000081 AACAGGTTGT TTCTCTGCAG TTTCCAACAT GGCAGGGAGG TTTAATAGAC ATGGATAAGA AGTCCACTCA CAGAAATCCT 000160 000161 GAAGATGCCA GGGCTGGCAA ATATGAAGGT AAACACAAAC GAAAGAAAAG AAGAAAGCAA AACCAAAACC AGCACCGATC 000240 000241 CCGACATAGA TCAGTGACGT CTTTTTCTTC AGATGATCCT ATGTTTCCTT CTTCCTCATC ATCGTCTTCA GGAAGCCAGA 000320 000321 CAGATTCAAG TATTGAAGAT GCTGCCAAGG GAAAAATTAA GAAGAAGAGA AGAGAGAAAA CAAATAAATG GGAAAAAAGA 000400 000401 AAGGGGCATC ATGGATCCTA ACAACGTGTG ATGTCTCCCC CGGACGCCCA GCTTTAAAAT TTCTCTTTTG TACTCTGTCC 000480 000481 CTTTATTTCT CAAGCCAGCC GACGCTTAGG AAAATAGAAA AGAACCTACA TGATTATCGG GGCAGGTCCC CCGATATCTG 000560 000561 GCGCCCACGT GGTCTTTCTT TTTTCCTAAG TGCATGAGGG AACCCGATTC CCTTTGGTAG GTGCGGTGAA ACATCAATCG 000640 000641 GCTTGGTCCA CAGATAAGCG TGTTCAACTC CCCGACGAGT GGACAAAATA TGAAACACCA AGAAAAAGAG AAGGAAAAAA 000720 000721 AGGAGGAAAC AACCACATAT GTCACCTTTC CAAGAGGGAC TGAAACTGGG CTGACCCTTT TGATTTCCAA GCTCAGCGTT 000800 000801 TTGGTGTAAG GCGGCCAAAG AAGGATGCGG AGCCCAGCAC TGTGAAGCCT ACAAAAACAT TGATGCGCTG GCTTGGGGAT 000880 000881 TTGAATTTGA ACATCTTTCA CACTAAGTTC AGACTCATGA AACCAATCTT CAGATGCTCT GTAAACCACA TAATAAAGAG 000960 000961 TTTGGAAATT ATATTTTGTT TTTGAAGGCC CACGTGCAAA ACTTG |
Predicted Small Protein
Name | NONHSAT009292_smProtein_272:430 |
Length | 53 |
Molecular weight | 6361.5494 |
Aromaticity | 0.0192307692308 |
Instability index | 63.4615384615 |
Isoelectric point | 10.8930053711 |
Runs | 7 |
Runs residual | 0.0157540199913 |
Runs probability | 0.044035632271 |
Amino acid sequence | MILCFLLPHHRLQEARQIQVLKMLPREKLRRREERKQINGKKERGIMDPNNV |
Secondary structure | LEEEEELLLLHHHHHHHHHHHHHLLHHHHHHHHHHHHHLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |