NONHSAT009451
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT009451 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
2038 nt |
Genomic location |
chr1-:214202234..214204109 |
Exon number |
1 |
Exons |
214202234..214204109 |
Genome context |
|
Sequence |
000001 GGGGAGGTGA GTTCGCAGCC GGAACGTTGC AGGCACTTGT TTCCTCAGTG GATGCCTTTC GGCGCGCCGC CGCCCGGCGC 000080
000081 CGCGGGACTG GGAGACCGGA TGGTGGAATT CTGGAAACAT CCTGTGTTGA AGCAACCAAA CCTTGCCAAA CGCTCTTGGC 000160 000161 AGCTGAATGA ATGTCACAGA GAATAGAAGG GGAATTACAA AGGTTAAAAA GAAGACAGCC TCTCCTATTT TCTGGAGACA 000240 000241 GAGAAGCTCA TTTTTCACAC CTCTGAACCG TCCGTAAGCT CATTCATCAG CCTCTTGCGG GGGACCTAAA CCTTGCCCCT 000320 000321 TGCTCAGTTC TCCATGGACA CTCCTCCCTC CTCAATCCCC TTTAAAAATT GGCCCTCTGG CCTCATTTCA TCACTGAAAT 000400 000401 GATCTTCACT GAAATGGACA GAAAACAAAC CAGGCATCGA CTTCTTTCCC TGGCCACCCA CCCCCCAACC CGTAACCAAA 000480 000481 GGCTCCAATG GCCTATCAAG CCTATCAATA GATTACAAAC TTTTCAAGGG AAATCATCTT TATAGCTGAT CTTTTAAGCT 000560 000561 AATTTTTTTT TTCAAACTTG CTTCGATGGA GAAATGGAAA AGGACACGTG TACTGGCAGG CATGGCTAGC GAATGGGAAA 000640 000641 GTACAATCCT GCCTAGTATT TTGGTGAATT AGTTTGTGTG TGGGTTTTCC TTCTTCTTCC TCCTCCATTT TTTTTTATAC 000720 000721 TATAAAAGGG CAATAAAATG CTGACTGTAA GAAGACAATG TCAAGGAGAA AAGGGTACTG GTATTTTGGA TACTCTTCAC 000800 000801 TGCTCGCCTT GGAGAGAGAG TTATTCTTGT CACAAACCCT TTTTGTCTGC ATCTGCTGAC TGCTTGCCTG TAGCCAGCAG 000880 000881 CATACTTTAA CTGTTTTGTC ACCTCCTAAC ATCACATGCA TCAGCTGTTG GGCTTTTGTT ACGGGTATTG TAGAACTAAT 000960 000961 CCGCTGTGGC TGTTCTACTG TGCGGTAAAT AAAACAGAAA CGGGCTTCTC AGACTATTCT GCATGAATAT TTCAGATGGC 001040 001041 TTTTACAACT CCGATTCACA AAATCAAATA AATAAATAAC TCCCCAGCCA CCCCCCAGCC TCTCCCCACA CCCAGAAACA 001120 001121 AAACCCCTCG ATCTAGCCCC AGATGCCTCC AAGTCAACTG CATTCAAGAG GCTGACTTGA GCCTTCAAGC AATTGTTTCA 001200 001201 GGGAACTCGA AAGAACAGTG CTCTCTCAAT TTTCACACCG TGGAATTCAT ATACAGTAGT AGAGTTAAAT ATATCTAATG 001280 001281 CTGAAGCAGC TCTGAAAAAT TGGAGAAAGT TACTTTTTGT CCCTGTGGGC CTTTAAAAAT ATATAGGTAA TGCCATCAAA 001360 001361 AATACATAGT GAAGAGCTGC CTTGTCAAAC TGCTTTTATT GTTTCCATCC GTATTTTCTT CCCTTCCACT CATCTGAAAG 001440 001441 GGGTCAAAGG TAGATGCTTG TGCATTTAGT TTATCCTAAG AGTCTCTTTT GTGCTCTATA TAAGAGCACA AAAGAAGAAC 001520 001521 CAAACTTTGC TGGGTTAGAA AAACTGCATC TGCATCATTA GCTCCTTAAC GGTATAATGA TGTACCAATC ATACATAGCG 001600 001601 AGGTATTTTT CTAGATGACT TCGAAGTGTC TTTGGAGAAG TTAAAAAGAG AATGGGCATC TGCACACGTG TGTGCACACA 001680 001681 CACGTACACA AAAATCTTAG GGAAGGAGAC AAATAGTTGA AGTACTTTCC CGAGCATTCA TTCACCCTAG AGTGCACATG 001760 001761 ATTCCTCTAA ACAAACTCTC CCATCCCTGC TGTTTGTTAA GTAAATATCG ATCAAGGAGA GACTCATCTC CTGACAGCAG 001840 001841 TGGCACAAGC TGGGGACTTA CACTGCAGAC AGAGTGGACT TAAATGGATA AACTCAGATG CTTTAGTAAC TCCTCATAGA 001920 001921 GATTATCAGA TGAAAAGCCA AGAACAGATA CGTTATTGCT GCTCCTCTTC ACTGTCTCAC TCACACTAAA CTCTCCTGCC 002000 002001 AGAGGCTGAA AAAAAAAAAA AAAAAAAAAA AAAAAAAA |
Predicted Small Protein
Name | NONHSAT009451_smProtein_737:889 |
Length | 51 |
Molecular weight | 5494.2901 |
Aromaticity | 0.06 |
Instability index | 64.384 |
Isoelectric point | 7.69927978516 |
Runs | 9 |
Runs residual | 0.0153216374269 |
Runs probability | 0.0215117077862 |
Amino acid sequence | MLTVRRQCQGEKGTGILDTLHCSPWRESYSCHKPFLSASADCLPVASSIL |
Secondary structure | LLEEEELLLLLLLLEEELLLLLLLLLLEELLLLLLLLLLLLLLLHHHHLL |
PRMN | - |
PiMo | - |