NONHSAT010104
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT010104 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
992 nt |
Genomic location |
chr1-:230020322..230027825 |
Exon number |
3 |
Exons |
230020322..230020921,230021287..230021565,230027713..230027825 |
Genome context |
|
Sequence |
000001 aactaagcaa ctagaattcc aaagaaggac aagcccctcc aaagacagga agcatgaggg caggctcatc agtgtcagag 000080
000081 caggggagac cagcacagac accttacaag cagaatgacc ttctgtggct acagagaaag gcttcaggca aagagatgca 000160 000161 gctctgggcc ccagagtccg ctggagcaca ctgaaGCTGG AGCACACTGA AGTGGAAGAT GGGGCTGCAG ACAGAGACTG 000240 000241 GGCAGCCTCT GCTCCAGGGA GGCCCGAGAG CCAGAGAGCA GATTCCATAA GAAGAATAAC TCCCATTCCT CATGCATGag 000320 000321 accctctgct aaatgcttcc tgtgcaccac ctccagaaat cctcccaagc caggacacca gcagtattac aggtaagaaa 000400 000401 atggaggctc ccagagattt gacaacctgc ccgcagcaat gaccaaatca gacttggtgc taagtctgca cctccccaaa 000480 000481 gtcagtgtgt ttgtatgctc tgctgccact gccccccgct ggccctGCAC ATGATGTGAA CCATCAGGCA GACCTGGAGT 000560 000561 TCTGTCTCCT GGGTGGGCTG CTTGCCAACA CCAGGGTGGC TGGCCCCTGC CTGTGTCAGG TCCTGCAGTG TTGACTCTCT 000640 000641 TCGTGTGATG TTGGGCAGGT GGAGCTGGTT GTGCTGAGCC TGAGGAAACA TCCAATGTGC CAAACTTTCT TGTGTGTTTC 000720 000721 CCTCTGCTGG TTATTTAGTA AGCCCAGGAA AAGAGCAAAT CCTGCCCCCA ACAGATGATC CTCTCGATGA GAGTGGTTAT 000800 000801 GGTGATGATG CCAGCATGCA GTGGGGAGAT TCGACTTTTC GAGATTCTTC CAGCCCTTTG CTTCCCACAT TTCATAATGC 000880 000881 TTGATGGCAA CAGCTCTGCT GACTGTTTGG GAAAAAGACA ATACTTATGT CCCTTTTAGA GACACTTTAC TCAGTCCCTC 000960 000961 CCGCAATGCT TAGTACgcag agaaaatagt aa |
Predicted Small Protein
Name | NONHSAT010104_smProtein_53:193 |
Length | 47 |
Molecular weight | 5097.6616 |
Aromaticity | 0.0652173913043 |
Instability index | 55.9913043478 |
Isoelectric point | 9.51910400391 |
Runs | 6 |
Runs residual | 0.0309265010352 |
Runs probability | 0.0319142672084 |
Amino acid sequence | MRAGSSVSEQGRPAQTPYKQNDLLWLQRKASGKEMQLWAPESAGAH |
Secondary structure | LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHLLHHHEEELLLLLLLL |
PRMN | - |
PiMo | - |