NONHSAT010155
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT010155 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1576 nt |
Genomic location |
chr1-:231154922..231162695 |
Exon number |
3 |
Exons |
231154922..231155872,231161745..231161812,231162139..231162695 |
Genome context |
|
Sequence |
000001 GAGGGACTCA GCAGGAGAGT AGATCTAGGA TTCCAGATGA TCTTCTTCCA TGGTTTTTGA GCACATACTA TGTGACCCCG 000080
000081 AGAGAGTGTG GCTTTCTCGA TTAAAGTTAT TATTTCTTTT ATGAAATCCT AGCAAAGATA GGGACGTCAG AGCTGGCCGA 000160 000161 GTCAGACTCC TGGGGGCATG TTGATGGCAT CCAGATGCAA TTCTGCAGAG GAATCCTGGA AAACAGGAGT AAGTCTAGAG 000240 000241 GAAAGGCCAC GGGTGTTAGT GGACGAGAGG TCATAATGAA AATAGGGGAA GGGCCTGAGA TATTTAGCTT GGAGAGAAGA 000320 000321 ACACAGGTTT GGTTTTTGTT TTAGGGCATG GGGTGGTGGA AAGTAAATGA CCTTCAGATT AAAGGGTAGT AGTTAGGAGA 000400 000401 GAGTTAAATT AGATCTGTTT GGATGCTCAG CTGTCACACC CAGCATCAAG GGCTCTGTGG GGCCTCCAGG CTGGGAGGCT 000480 000481 TTGACTTTGT ATAAAATAAT CGTATTGGTT TGGAGAGGAG TGCAGTGGTT TGGAAGGTCC TCCTTTTGGG GTTTGAGctg 000560 000561 agcaatttat ccacagtttc tcagctggtg agtggcggag ccaagatctg aacccaggca gggagGTTGG TCTCCGCCAG 000640 000641 CTGGACATGT CCTTGCTCTG CCAACTGTAC AGCCTCTACG AGTCGATTCA GGAGTACAAG GGGGCATGCC AGGCAGCCTC 000720 000721 CAGCCCAGAC TGCACTTACG CTCTGGAGAA CGGCTTCTTC GATGAAGAGG AGGAATATTT CCAGGAGCAG AACTCCCTGC 000800 000801 ACGACAGGAG GGACCGAGGC CCTCCTCGGG ACTTGTCACT GCCTGTCTCC TCCCTCTCCA GCAGCGACTG GATTCTGGAG 000880 000881 TCCATCTAGA GGGTCTTGGG AGGGATGTGA CTGTTGGGAA GCCCTTCCTA CTGGACACGC TGTCATCATT TGCTGCTTCT 000960 000961 CTTGCAAGAA AGCACCTCCG TTGTGGACGG TCCTCGGGCA CAGGGGATGA GCGCTACCAG TTTCATTTGT AGGCAGGGAG 001040 001041 TTCTCCGCGG ATGCATGGTG GCAGTCTGCT TTGATGGCAG CAGTTTCTGC TTAGGTGACC TAGAGGTCCT CAGCAGTATC 001120 001121 CTCCACACCT ATTTATTGAG GTGCACCTGC TGGGGATTCA TAATGAGAAT ATAACAAGAG GATCTCGGTG AAAGGCCTTA 001200 001201 GTGGGTGTTT TGTGTGAGGT GGCTTGTAGC TAGCTACTTC CTTACAGATG GTAGAGTATT CCAATCCTCT TTGTGTTAGG 001280 001281 GTTCTTGCTT CCAGTTTGGG ATGTATTAAA ACCACCATTT CACTGCTTCC CTTCCTCAAT ATGCTCTGCA GCTTTTCTTG 001360 001361 CTGTTTAAAC CTCTCGCCTC AGCTTTATTT ATTTGTAAGC TGCATTACTA ACTGCCCAGT GATTCGGTGA AAGCTTTTTA 001440 001441 CTGAAAAAGT TAACATTTCT AGTCATCCCA ATCAACTGGC TTTTTTCAAC CAAAATTTTA TATCATTCTT TGTCTATCAG 001520 001521 ATACGAGAGG AAGGAAGATA ATACGAAGAC ATGTTGAATA GTGAAAAAAA AAAAAA |
Predicted Small Protein
Name | NONHSAT010155_smProtein_761:1009 |
Length | 83 |
Molecular weight | 8802.1034 |
Aromaticity | 0.0731707317073 |
Instability index | 88.8780487805 |
Isoelectric point | 8.94879150391 |
Runs | 11 |
Runs residual | 0.00175535846268 |
Runs probability | 0.0451574569223 |
Amino acid sequence | MKRRNISRSRTPCTTGGTEALLGTCHCLSPPSPAATGFWSPSRGSWEGCDCWEALPTGHA VIICCFSCKKAPPLWTVLGHRG |
Secondary structure | LLLLLLLLLLLLLLLLLHHHHHLLEEELLLLLLLLLLLLLLLLLLLLLLLLLEELLLLLE EEEEEEELLLLLLEEEEELLLL |
PRMN | - |
PiMo | - |