NONHSAT010224
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT010224 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
933 nt |
Genomic location |
chr1+:232862640..232869473 |
Exon number |
3 |
Exons |
232862640..232862737,232867211..232867272,232868701..232869473 |
Genome context |
|
Sequence |
000001 GAAACCCAGT TTGTACTAAA AATACAAAAA TGAGCTGGGT GTTGTGGCAC ATGCCAGTAA TCCCAGCTAC TCTGGAGGCT 000080
000081 GAGGCAAGAG AATCACTTAT CATTTCATCT GAAAATATTT TACTATGTAT TTCTGCAAGT TATGGGCTTA TTATTATTAT 000160 000161 AAATATTATT TGCGGTTACT ATCCTTTTTG AGAACCCAAC TGTCCCATCT TTAGTGAGGG TGTCTCTTTA ATTTGGCTTC 000240 000241 TCAACCCTTT TGACATCACC CTAGTGATCT TTAAAAGATT TCTCTTATGT TCTAGTATAA TAAGATGCTC TAGCTCATCT 000320 000321 TGTCTATTTC CTGAACCAGA TCTGACACAG TCATTTCTCC AAAGAGACTT CACGTGCGAA ACGATGTTGC GAGATCACAG 000400 000401 TCTGAGCACT AGACGTGCTC CTTGCTCCAT ATTTCTTTGC CCCTTTCAGT GGACAAGGCT ATATAAAATA TGCACTTTTA 000480 000481 AAAGAAAAGG ATACCTTACG AGCATAGTGA CATAGTCAGC TGAAATAGAA GACAGAGAAA TTTTACTTTT TGATTTTATA 000560 000561 TTTGTGACTC TAATCACTTA TCCTGAAATT CTTGGTTCTG GCAAAGTTAA CATAATTATT TGTTTTTACC TTACATGTCT 000640 000641 TAGTTTCAGA AAAATGATGC CCAAATCATT CAATATAAAT ATTGAATACA GTTTAAAATT CCTCCGCAGT AGGACATGCC 000720 000721 TGTTACGTTT TTCTGTTTTC AAATAACTAC AAAGATTTTC TTAACATTAT AAGAGTAATA TTCTTAGAGG AGTGTAGAGC 000800 000801 TGAGAGGAAA TACTTTTGTG TTTATAGCGA AAAAAGTATA TTGAAGTGGA ATAGTTGGTC AGATTACACA GTGGAGACGA 000880 000881 TGGAGCCTAC TAAGAAGGTA AGACTCCCAC ACTTGGACTC ACTTCAGCCT TCT |
Predicted Small Protein
Name | NONHSAT010224_smProtein_29:190 |
Length | 54 |
Molecular weight | 5969.0612 |
Aromaticity | 0.11320754717 |
Instability index | 76.6547169811 |
Isoelectric point | 4.48089599609 |
Runs | 10 |
Runs residual | 0.0284169351127 |
Runs probability | 0.0460872637343 |
Amino acid sequence | MSWVLWHMPVIPATLEAEARESLIISSENILLCISASYGLIIIINIICGYYPF |
Secondary structure | LLEEELLLLLLHHHHHHHHHHHHHHLLHHHHHHLLLLLLLEEEEHHHHLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTToooo |