NONHSAT010365
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT010365 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1363 nt |
Genomic location |
chr1-:235703353..235704715 |
Exon number |
1 |
Exons |
235703353..235704715 |
Genome context |
|
Sequence |
000001 TGCTAAAAAT TATTATTCCA ACAATTATAC TGTTACCAAT GACATGATTC TCTAAAAATT CTATAATCTG AATCAACATG 000080
000081 ATTATTCACA GCCTACTCAT CAGCCTCGCC AGCCTACTAT TTTTTAACCA ATTCAGCGAT AACCCATCCA ACCTCTCATT 000160 000161 AATTTTCTCT TCTGACCCGC TGACGTCACC GCTTCTAATC TTAATAGCCT GTCTACTGCC TCTTACAGTT TTTGCTAGAA 000240 000241 GCCAATATCA CCTGTCCAAT GAATCACCCC CATGAAAAAA GCTCTATATT TCTATATTGA TTTCCCTACT GACTTTTTTA 000320 000321 ATCAGAGCAT TCACAGCCAC AGAACTAATT ATATTTTATA TCCCCTTTGA AGCCACACTA GTTCCTACCC TAATTATCAT 000400 000401 CACCCACTGA GGCAACCAAC CAGAACGCCT CAATGCAAGC TCATACTTCT ATTTTACACA CTAGTAGGAT CCCTTCCTCT 000480 000481 ACTTGTAACA CTTGTTTATA CTCAAAATAC CTCAGGTTCA CTAAACATGC TAGTAATAAT ACTTACTACC CAAGAGCCAT 000560 000561 TAGCCTCCTG ATCCAACAAT CCTACATGAC TAGCATGTAT CATAGCTTTT ATAGTAAAAA TACCTCTATA CAGGTTTCAC 000640 000641 CTATGACTCC GCAAAGCCCA CGTAGAAGCC CCTATTGCGG CTCGATAGTA CCTGGAGCAG GACTCCTAAA GCTAGGTGGC 000720 000721 TACAGTATAA TACAACTTAC TCTTCTCCTC AATCCCCTAA CAGAACATAT AGCATACCCT TTCCTCATAC TGTCCCTATG 000800 000801 AGGGAGAGTT ATGACAAGCT CTATTTGTCT ATGACAAACT GATCTAAAAT CATGTATTGC CTACTCCTCT GTAAGCCACA 000880 000881 TAGCACTTGT TATCATGGCT ATCCTCATTC AGACCCCTTG AAGCTTAACA GGTGCAGTCA CCCTTATAAT TGCTCATGGA 000960 000961 CTCACTTCAG CCTTACTATT CTGCCTAGCA AATTCAAACT ACGAGCAGGC CCATAGGTGA ACCCTATTAC TTACCGAACG 001040 001041 CCTTCAAACA CTGCTTCTGC TAATAGCCTC TTGATGACTT CTAGCAAATC TTACTAACCT TGCCTTACCC CACACCATTA 001120 001121 ATCTAGTAGA ACTCTTTGTG ACCGTGGCCT CATTCTTCTG ATCTAATATC ACTATTATGC TTATAGGACT TAATATACTA 001200 001201 ATTACAGCCC TTTACTCCCT AAATATGCTA ATCACAACAC AACGAGGGAC ACTTGCATAT TATATTAACA GTACTAAACC 001280 001281 TTCCTTTACA CGAGAGAACA CATTAATACT TATACATCTT GCGTCTATCT TCCTATTATC TTTAAACCCT AAACTTATTA 001360 001361 TGG |
Predicted Small Protein
Name | NONHSAT010365_smProtein_77:274 |
Length | 66 |
Molecular weight | 7172.3192 |
Aromaticity | 0.0923076923077 |
Instability index | 60.4646153846 |
Isoelectric point | 5.20379638672 |
Runs | 10 |
Runs residual | 0.00355769230769 |
Runs probability | 0.0661985514926 |
Amino acid sequence | MIIHSLLISLASLLFFNQFSDNPSNLSLIFSSDPLTSPLLILIACLLPLTVFARSQYHLS NESPP |
Secondary structure | LHHHHHHHHHHHHHHHHHLLLLLLLLEEEELLLLLLLHHHHHHHHHLLLLLEEHHHHHHL LLLLL |
PRMN | HHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLL LLLLL |
PiMo | TTTTTTTTTTTTTTTTTToooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiii iiiii |