NONHSAT010516
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT010516 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
792 nt |
Genomic location |
chr1-:241235770..241237393 |
Exon number |
3 |
Exons |
241235770..241236199,241236337..241236603,241237299..241237393 |
Genome context |
|
Sequence |
000001 CCCCATCTCT ACTAAAAATA CAAAAATTAG CCAGGCCTGG TGGCACATGC CTGTAATCTC AGCTACTCGA GAGTCTGAGG 000080
000081 CACGAGAATC ACTTGAGTTA GTCTCCCGTT CTTCCCCAAA CCAATAGAAG CTGCAATAAA GAAATGTTCG AAAGGTGGTA 000160 000161 ATCCACAAGG ACAAGGAGAA CAGGACAGAA GGAAATAATG AATGAAAGAT GTGGGGTTTT TTTTGGAATA AAGGAAGGGA 000240 000241 AGTGATGGAA GAGCAGTAAT TGCCTTAGCA GAAAGGATAG AGCTACAACC CAGCTCTCAA CATGGAGATA CCTGTGATTA 000320 000321 ATGAACCAGT TTGCCCCATG GAACTCAGCA CCATGAGAAA TGAAGCTCCT GACTTGAGAA CACCAGACAG TGGCAAGACC 000400 000401 TGGGATAGAA AAGGCATGTA AATACATGCC TATATTACTG AACTTGGAGA GCTTGACCTC CTTTCTCCAT CCTGCCTCTG 000480 000481 GTGCTATCGT GTGCATATTA CCTGGCTGGG AGCTTAGGGA GTCCCCTCGA GAAAAGACAG GTGCATAAAT ACACACACCT 000560 000561 GGAGAAAAGC ATTGATTCAG CTTCAGTAAC CCAGCATATA CTTCTTCAGG GTCTCATCCC TGTCCCCACA GGACACCATC 000640 000641 AACCTGGAGG GACCGGAAAA CACGCATCAC AGGGAGTGAG CCACTCTGTA GTTGAGAAGT CAATTTCATA CTAGAGCTGA 000720 000721 ATGGTTTTAC GGTCCGCAGC TGTATCCAAG AAGGGCGAGG GGGAAAATTC CATGCCTCAC TGGTACCAGG TA |
Predicted Small Protein
Name | NONHSAT010516_smProtein_425:547 |
Length | 41 |
Molecular weight | 4348.0519 |
Aromaticity | 0.05 |
Instability index | 57.415 |
Isoelectric point | 5.54888916016 |
Runs | 7 |
Runs residual | 0.00302419354839 |
Runs probability | 0.0302066772656 |
Amino acid sequence | MPILLNLESLTSFLHPASGAIVCILPGWELRESPREKTGA |
Secondary structure | LLEEELLHHHHHLLLLLLLLEEEELLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |