NONHSAT010727

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT010727

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2598 nt

Genomic location

chr1+:246939315..246955687

Exon number

6

Exons

246939315..246940404,246943686..246943885,246944781..246944929,246952919..246953000,246953748..246954497,246955359..246955687

Genome context

Sequence
000001 AAATTGGATG GAAAGAAATT CTGTGTGCTC CCAGGATTCC AGTTCCTTAC CGGAGGTTGG TGCCGTCTGA GTCTGAAAAG 000080
000081 CTGCCCTCTT GCCGTGTTCA TGCTTTGGTA GAACACCTTC AGAGCCTTGG CAAGCTCTCG GTCAGAGCCG GCTTGCTGTG 000160
000161 TGCACATTTG GCTCATCTCC CCGGCGGATG GCAGTTGCGC AGTCATCCCG CTGATCTTCA GAGTGTTGGA AGGCTTCGGG 000240
000241 GCTGAGGTGG AAAAAGGTAA CATTGATTTA TGTATCTCTT TCTCTGGGCA TCTCTATATT TATTTTGGTG GCATTCTACT 000320
000321 GCATCAGCAT TTATCAGGCA CCAGTTTGGA TCCATCCAAG GGAAAGGGGA AATCTCACAG GGCAGAAGAA ATGTCCGGCA 000400
000401 TTTTTTGTTT ATGAAAGAAG ATACGAATTA ACTCATTTAA AAGTTTGTTT CTTAAAAGAC AAATACACAT CCCAAATGTA 000480
000481 GGAGTCTAGG GATAAGCTAA ACAGCCAAGA CTGGAGCAGT CTCTCACCTT GACCAGAAGC AGTTTTCGCA AGTGATGCTT 000560
000561 TGAGAAGCAC GTTCTCCTCT CTCAGGGCTC TGTTAATGTT CCTGAGCGGT TCCGTCTCCT GCTCTAGCTT GAGCAGCTTC 000640
000641 AGATAAAGTT CTGGTATCTG GTTTGATGCT GCCTACCAGA AAACATGTCA GTTTCGTCTT TTGTTGTATC ATCTGCATAT 000720
000721 CCTTTGAGAC TGGCAATGTT TGCTACCATG GGAAAATCAA ATGGGATGGG AGTGTGTGTA TGGTGAGCAG AGTTTAAGCC 000800
000801 CCTCAGGGTA CACAGGAGTA AATAAAGAAA ACGTTTGTTA AGGGGGAAGG AACGTCAAGC AGCCGTCCTC AGAGATTTTC 000880
000881 TAGCCACCTG GGATGCCCAC TTTAGTGTCC TATGTACACA CCTGGCTTAT ATCCTTCACA GTGGAAATTT TCTTGGTGTC 000960
000961 TACCAGGATG TGGCCTTCAC CTGTGACCAT GAGGCCCAGC TGAGAGCAGC TCAGCTCGGT GCAGCCTTCT GTAATGGGGA 001040
001041 GAGACACAGT CAAAGAAAGA AACATCCCAG TCGCCCAGCT CCAGTGTCAG CTTCATGCAG TAGGCCAGCG ACTGGAGCCA 001120
001121 GATGTGAGCT GAGCCCAAGC GGACGACCTC GACAGGATCC CAGAAAGGGT CGTCATCTCG AGCCACAGGG CCGTGATCTC 001200
001201 CATCTAGAAA GCGCTGGTAA AGTTCCTGCA TTAGGAATTT CCTATTGATG AACTTGGCTT TTGACCATAT CCACACCTGG 001280
001281 AAACACAGAG GGGTCCACAC CCAGTGCACA GCAGATCCAG GACAACAGCC TGCCGCTGTC TTCCTCCTCA CTGGGTGAGG 001360
001361 ACAGGGCCTC TGTCAGCACT GGCTCTGGAG AGGAAACAAA CCTGAAGCCA CAGGAGGAGG GATTCCAGAG GGATTCCAGC 001440
001441 CGCCCTCTCC AGCTGGAAGA AGTCGTAATC GAACCTGCTC AGGTCCTCAC TGCCCCACTC CGAAGGAAAC CCCACGTACA 001520
001521 GGTGAGGTCA GAGGAGTGAA GTGACTTGCC CAAGACCACA CAGTGAGTCA GGAGCAGGCC TGTCCCTCCA GCAGTGGTGC 001600
001601 CATGTTGTCC CCAAGCCATG GTGGCAGAGG AGCTGGTGTG AACGCCCCAT CCTGCCACGT CTGTGATGTG GGCACCTCAC 001680
001681 ATGACTGTCC CCTCCCAGCT CTTGGGGGGG ACCTAGGACA TTCTGTGAGC CTGCAGGAAA GTTTACCAAA TGCTGCAGCT 001760
001761 TTGTCCTGGT GGTGATGGGC ACCCCGTTAA CGGCAACCTT GCATTTGCTA TGTGGAGTGA CCGTCACTTT ACCGTCGGCA 001840
001841 TTTGTGAAGG AAGCGTGTTT ATCTGAAATT CTAAGAAGAT GAGAGTCAAA GACACCCAGC AAACGGCGGT TTCCGTGAGC 001920
001921 AGGTAGGCTG ACCTTTCTCA TGTGCACAGG AGGGAAGGTC TACAGCTGCG GAGGATGGCA GGTGGCATCT CGGGGCCTCC 002000
002001 TGTGTGCTGT GGCCCATGAT GCATGGGGAC AGCAGCGGGC GCAGAAGGAC CCTGCCCTTG GGGAGCACGG GGAGCTGGGA 002080
002081 GACAGCAGGC AAGGGCTTCA TTAACAGAAC GAACACCAGC TGAGGGCCTA GCACTGCGGG GAGCCGGCCA AGGCCACACT 002160
002161 GGAGTCCTCC CGCTCCCAGG CCAGCGGGAT GGGGTGGTGG GAAGATGGCA GCAAGCAAGC TTCAGAAGAG ACGCTCAGGA 002240
002241 GGCGACTCTT AACGAGCCTC ACCTACTCCG GGGTTGGAGC CCAGGAAGCA AACCAGCACT GCACCCTAGA TTTCAGCCAG 002320
002321 AGGACGAAAG CCCTGCCCTC AGCTTTCTCA GACCAGCCCT GGAGTAGGTG GCCCGGGGAG ACCTGGGCAG TGTCCCTGCT 002400
002401 TGTCCTGCAG ACTGTGTGGC TCTGCAGACC TCTAGATGGA GGAGGCACAA TTCTCTAATG CTGGACGAGG ACACTGATCA 002480
002481 TGGAAACTCA CCCCAAACCT TGAATCGTGA TAGCATTTGA GGCAGCCTGA CCGGTGCCAC ATGAACCTGA AAGGAATCAA 002560
002561 GATATAATTT ATTTTGAAAA TAAATCAGAC ACTTTCAG
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Predicted Small Protein

Name NONHSAT010727_smProtein_1601:1774
Length 58
Molecular weight 5721.3166
Aromaticity 0.0350877192982
Instability index 65.0333333333
Isoelectric point 5.57464599609
Runs 7
Runs residual 0.0311403508772
Runs probability 0.0252731723321
Amino acid sequence MLSPSHGGRGAGVNAPSCHVCDVGTSHDCPLPALGGDLGHSVSLQESLPNAAALSWW
Secondary structure LLLLLLLLLLLLLLLLLLEEELLLLLLLLLLLLLLLLLLLLEELLLLLHHHHHHLLL
PRMN -
PiMo -