NONHSAT011003
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT011003 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
778 nt |
Genomic location |
chr10-:3179920..3180807 |
Exon number |
2 |
Exons |
3179920..3180316,3180427..3180807 |
Genome context |
|
Sequence |
000001 ACGTTACTCT CTGGAGCCGC TTTTGCTCAC AGCATCATCA GCCTCACGCG GCGCTGACTG CATCCCTGCT GCAGAAGCAG 000080
000081 GCGTGGGTAG GGGTCAGCGT GGCACGTGGG AGCTGGAGGT CGGGGTGTGA TCTCTGGGTT GTTAGACACA TCCCTGTGGT 000160 000161 TGAAACATGC ACGTGAAATG ACAGTGAGAT GCCTGTGTCC CCTCCGGGAC ATGAGTGCAC AGCCCACAAC GCGAGCTCCC 000240 000241 GGGCAGCGGC TCCATCGTGC CTGTGGATTG TCTTCTAGGA ATGGACCACT TCTTGTACGG CCTCTCGGAT GAGATGAAGC 000320 000321 AGGCCCACAG AGAGCAGCTC TTTGCTGTCA GCCACGACAA GCTCCTGGCC GTGAGCGATA GATACCTCGG CACTGGGAAG 000400 000401 AGCACACACG GCCTGGCCAT CCTCGGACCC GAGAACCCGA AAATTGCCAA GGACCCATCC TGGATCATCC AATGAGCAGC 000480 000481 CGTGGCGCTC GACTGCACAG GAGCCCGAGA CAATACACCT CCGAGCTGAA TATGAAAAGT CAGAAATGCT ACTGCTTTTT 000560 000561 CCAAGAATAT TATGTCATTG AGTGTCGCCA AAGCCCTTGA CTGGCGAGTC AAAAACTCAG ATCTATCTTA AGAGTGACCA 000640 000641 GGAAGAGGTT CATTGAAATA ATCATGCATG AAGCGCCAAA GATGCACCAT GTAGAATTTT CACTTTGTAC TGGCAGGCTC 000720 000721 GTTTTACCTC ATTCTAGAAT ATTTAAGAAT CTAAAAATAA AGGGCAACTC TGACTTAA |
Predicted Small Protein
Name | NONHSAT011003_smProtein_188:277 |
Length | 30 |
Molecular weight | 3037.4536 |
Aromaticity | 0.0689655172414 |
Instability index | 134.55862069 |
Isoelectric point | 6.68511962891 |
Runs | 5 |
Runs residual | 0.0271551724138 |
Runs probability | 0.0293411058118 |
Amino acid sequence | MPVSPPGHECTAHNASSRAAAPSCLWIVF |
Secondary structure | LLLLLLLLLLLLLLLLHHHLLLLLEEEEL |
PRMN | - |
PiMo | - |