NONHSAT011030
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT011030 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
832 nt |
Genomic location |
chr10-:3519086..3535030 |
Exon number |
5 |
Exons |
3519086..3519202,3528345..3528428,3529845..3529916,3531376..3531426,3534523..3535030 |
Genome context |
|
Sequence |
000001 GTACCGTTCC AGTGTCACTG GTGAAAGTCA TTTGGTGTTG CAGTATTTTA CAGTGAACGA GCGCATCAGA CAACCGCTTC 000080
000081 TCCGTGGTTC AGCTGCAGCC TATATTCCCC GGGCTACTAA ATTGTAGCCA CAAACCAGGG ATCCAAATAA TAACAAGAAG 000160 000161 ACTCCTAATC TCTGAGTGTT TAACCTAGGT GAAACTCGCT AAATACTTTG TACATAGATT ATCTTATTCA ACCTGAACAA 000240 000241 CAAAAGCTAA CAGATAGGTA CAGTGATGCT CGTTTTATAG GTTAAAAACA GTAAGCTTCA GAAAGTTGAG TATCTCCTCT 000320 000321 AGGATATTAC AGCTAGGAGT GTATCAAATC ATGATTTTAA CCTAGGTACA GGCAACTTCA AGGTTTGAAC TTTAAATCAT 000400 000401 GGCTTCATTT GAGGGGAACA AAAGAATTAT TATAAATAAT TTTATGTGTC TCAACATAGC AGAATGTTTA AATTTCTATT 000480 000481 AAAGATAGAC TACCTTACAA AGCGAGGTTT TCAAATCTCT TCTAGCTATT TTGAAATATA CAATAAATTA TTGCTAACTA 000560 000561 CTCCATGAAC ATCACCTGTT ACCACTTAAG AAGGGTGCGT ACCCTCCAGC CGCATCCATG CCAGTTCCCG TAACCCTTAT 000640 000641 GAGGTTCTGG AGTGGCAGCA GCAATGGCCT CCTGCCCTCC TGGCGGGCTG GAGCCTCCTC CTGGCAGGTG GGGTATTGAT 000720 000721 AAGAACAACA GCTTACACTT CCCGAGGATT TGTAACGTGC CAGTACCTGG AATGAATCAA TGTCTTTATG CATTTCTCTA 000800 000801 CACTAAGTCC TCAGAGTACA GAAACCACAG CA |
Predicted Small Protein
Name | NONHSAT011030_smProtein_617:718 |
Length | 34 |
Molecular weight | 3626.1273 |
Aromaticity | 0.151515151515 |
Instability index | 44.4515151515 |
Isoelectric point | 10.8344116211 |
Runs | 7 |
Runs residual | 0.0279973649539 |
Runs probability | 0.0375375375376 |
Amino acid sequence | MPVPVTLMRFWSGSSNGLLPSWRAGASSWQVGY |
Secondary structure | LLLEEEEEEEELLLLLLLLHHHHLLLLLEEELL |
PRMN | - |
PiMo | - |