NONHSAT011054
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT011054 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
764 nt |
Genomic location |
chr10-:3818188..3822409 |
Exon number |
3 |
Exons |
3818188..3818595,3821539..3821782,3822298..3822409 |
Genome context |
|
Sequence |
000001 ACAGATGCTC ATGGGAAGGG TGTGAGTGGC GTTTTGCAAG AAGTGATGAG TTAACCAGGC ACTTCCGAAA GCACACCGGG 000080
000081 GCCAAGCCTT TTAAATGCTC CCACTGTGAC AGGTGTTTTT CCAGGTCTGA CCACCTGGCC CTGCACATGA AGAGGCACCT 000160 000161 CTGAGGGAGC AGAGAGGTGG ATCCTGTAGG CTAAAAGGCT TCCAGGCTGA GAGCCGGCCG TGGAAGGAGG GATGCGTGTT 000240 000241 CCAGCCAAAG CATGCCGTTC TGCACCCTAC CCAGTTGCCT CCAGGGCCTC TCCTTGGAAG GTCTTTTGAG GGCTAAAAAG 000320 000321 GTCCTGTAAG AAGCGGCATA GCACCCGTGG TGCATGCCTG TCCTGGGAGC TGGAGAGGAT GTCAGCGAGC CTGACATTGC 000400 000401 CCTCCCTGAA TGCATCAAAT ACTCTTCTCC AAGGACTGAC AAAAACAACC CCCCGGCTGT GGGCACAGTA GGGAACCATG 000480 000481 CCGGTTTGAT CTTCCATTGC TCAAGCCAGG GAATGCATTG CAGAGGCACC TGCACAACGA CAAACTTGAG TGTTTCCCTG 000560 000561 CCACTTCTGT GCCTCCACAG CCTGCTCCAG TTCCGCAGCT AGAGCTGGGC CTACCTTCCC CAGCCAGCCC TGCCACACAC 000640 000641 CTGGCTGAGG CATGTCTGGG AGGGGTGGAG GAGGCAGAGG GACTCCAGGC CAGAGGGCTG TTCTCACAAC CTCAGCCCAC 000720 000721 TCTCAGTCAA GGAGGGCAGA AAATAAAAGA TGACATCACT GCCA |
Predicted Small Protein
Name | NONHSAT011054_smProtein_353:601 |
Length | 83 |
Molecular weight | 8692.8745 |
Aromaticity | 0.0365853658537 |
Instability index | 61.3731707317 |
Isoelectric point | 6.37286376953 |
Runs | 13 |
Runs residual | 0.0226348854398 |
Runs probability | 0.0295408530703 |
Amino acid sequence | MPVLGAGEDVSEPDIALPECIKYSSPRTDKNNPPAVGTVGNHAGLIFHCSSQGMHCRGTC TTTNLSVSLPLLCLHSLLQFRS |
Secondary structure | LLLLLLLLLLLLLLLLLLHHHLLLLLLLLLLLLLLEEEELLLLEEEEEELLLLLEEEEEE EELLEEELLLHHHHHHHHLLLL |
PRMN | - |
PiMo | - |