NONHSAT011178

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT011178

Source

NONCODE4.0

Same with

,

Classification

sense

Length

560 nt

Genomic location

chr10+:5741456..5756170

Exon number

4

Exons

5741456..5741700,5754357..5754502,5754786..5754881,5756098..5756170

Genome context

Sequence
000001 gccgtatgaa ttatatctca acattgtatt agaaaataaa attaatgaag catagaagtt acggagaact actggaaaga 000080
000081 agaaatacaa gaactcaagg aagagacagc cagacaacag tagagtgtga aatgggaacc agcagaaaaa aagaaataga 000160
000161 gaaaaatgat caagccattt cagaagtaca caagggagac tagacaccat ggcaaagatc ataaaagtag aaatgaaaTT 000240
000241 TTATGTTTTT GAGACAGTGT CCTTGAGTTC AGACTCTCTC TTCCAGAGGG CAGTTTCACT CCTCCATACT TCTTACTTGG 000320
000321 ACTCTTCATC TGAGCATGGT TTTCAGTACA GTCAAGTGAC TTTGGTGAAA AATGACATTT TCTTAAATGA GTACAAAACT 000400
000401 TTTTACCAAC AAAAAAAAGC AAGTAGTTAT ACTCAGGAAG AACTTCAAGA CACTTACGGG TTTCTTCTGT TTGATACTGA 000480
000481 AAAGCAGGCA AAATTGGTAT GTCAGTGTGG ACTCCGTGTT GGCAGCAGTG CTGTTACCAC TCTGGGTGAT CCAGCCAAAG 000560
[back to top]

Predicted Small Protein

Name NONHSAT011178_smProtein_44:202
Length 53
Molecular weight 6064.6349
Aromaticity 0.0192307692308
Instability index 62.1884615385
Isoelectric point 7.93157958984
Runs 10
Runs residual 0.041938287701
Runs probability 0.0389595477831
Amino acid sequence MKHRSYGELLERRNTRTQGRDSQTTVECEMGTSRKKEIEKNDQAISEVHKGD
Secondary structure LLLLLHHHHHHLLLLLLLLLLLLLEEEEEELLLLHHHEELLLLLLEEEELLL
PRMN -
PiMo -