NONHSAT011834
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT011834 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1174 nt |
Genomic location |
chr10+:26870673..26937946 |
Exon number |
3 |
Exons |
26870673..26871754,26937187..26937211,26937880..26937946 |
Genome context |
|
Sequence |
000001 CAGAAATCTC TCTTATTTCT AGTTTCTTAA TGTTTCAGAG ATTACGGGGG GAAGAGGGTT CTATGAATCC CAGACACTGC 000080
000081 GCGAGGCAGA TTTGGTTTCA GTAATTTTAG CATCATTCAT TGTAAGTTGA TGATCCCTAG GAACTTCTTC ACAGTGAGAA 000160 000161 ACCTGAAAGG TCCTAGCAGC CAGCAATGAA TGAAAGGTGG GGTGGGGCCG CTGGCAGTGA GGTTCCTTGT GAGCCATGTG 000240 000241 CCTGTGCTCT CAAGTTCCAA GTTTGTGGGG ATGCATGCAG GAGATTCTGG ACCTGATTGT TTCCTCTGAA CCAGGATGCG 000320 000321 TTCTGGTTGG TAGGACAACT GGCCTTCACT TGGTGGCCTT CAGTGGGTGC CCTCATTAGT TGCCTTCAAT TAGTGCCCTC 000400 000401 AGTTGGTAAT CTAAGTTGTT TCTCTTCAGT TGGTGGTCCT CAGTTGGTGG TCTTCAGTTG TTGGGCAGTG GTGGAAGGAA 000480 000481 GATGAATCCG TTTGTGCTCT CTCCTCCCCC AGTCACAACT CTCAGGCTTG TTGCATCTAG GCCCTTTTAA AATAAACCAG 000560 000561 AGATGTTGGC AGGTTTTATT AGCAGACAAG TCAGCTCAGG GTATGGGGGT GACGCGAGGT GCAGGCCGCT ATTGGAGTGC 000640 000641 CACCCCATGG CCCAGGGCTG CTCGTGCCAG CAATGCTTTT GCCAGGAAGA GGCGAAAGGT GTTTAGCTCT GTAAACTTGG 000720 000721 GGGTGAGCGA AGGCCCATGC TGCCCGAGAA GACCCCGTGG GGTCCACACG GAACGGTCGC ATATGAACCA AAGGCAGCCC 000800 000801 CAATCAGGGC TGGCGCAAGG GTTCTGCAGA GCTAGCCTGT GGCTCTGATG TCTACGACTG TGAAGTCAGC AAAGACGTAG 000880 000881 GCCACGATAT ACAGGAGCAG AGGAGCCCAG AACACCCTGT CCCCCAATGC CAGCCACAAG CAGGGCTATC TCAGGATGTG 000960 000961 GTGGGTGAAG CCGTCCTGCA GATCTGAGAA TCCTGAGGTG GAGGTGGCAC TAGCACCAAC TCCACTGCTT TGGAGCCTCC 001040 001041 CCAGTCCAAT TTGGGAGCCA GCGAGGGACC TGACAGCAGC ACATTGGACA CCAGAAGACA CCCAAAGgct ggaatgctac 001120 001121 gtcgcgatgt cagctcgctg caacccttgc ttcctgagtt catgtgatcc tcct |
Predicted Small Protein
Name | NONHSAT011834_smProtein_602:847 |
Length | 82 |
Molecular weight | 9054.2684 |
Aromaticity | 0.0864197530864 |
Instability index | 48.9703703704 |
Isoelectric point | 11.9381713867 |
Runs | 9 |
Runs residual | 0.03106859619 |
Runs probability | 0.0234351999058 |
Amino acid sequence | MGVTRGAGRYWSATPWPRAARASNAFARKRRKVFSSVNLGVSEGPCCPRRPRGVHTERSH MNQRQPQSGLAQGFCRASLWL |
Secondary structure | LLLLLLLLLLLLLLLLHHHHHHHHHHHHHHLLEEEEELLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLHHHLHHHHHHLLL |
PRMN | - |
PiMo | - |