NONHSAT012894
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT012894 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1522 nt |
Genomic location |
chr10-:43018630..43048236 |
Exon number |
4 |
Exons |
43018630..43018753,43019060..43019186,43046005..43046063,43047025..43048236 |
Genome context |
|
Sequence |
000001 CTCCGGTACA GCCTGGTAGG GAGGGCTCCC GGCATCTCCC TGCTTCGGGG CAGAGGATGC CGGGGGTAGA GTACGGGAGG 000080
000081 GCTGGAGCGA GGGTGGACTG GAGGTGCCGC TTGTCCTGGA GGTGGGAGAG AGGGAGCGGC TTTGCCGCCT GGCCTGCGTC 000160 000161 CTAATCCTGT CCTGGTTCTT CTGCTCCCGA AGGGAACGTA GGTCCCGCGC CTGTGATAAG TAAGGTTGGA TTTTCTCTTC 000240 000241 CCTGAGGTGA AGGATGCCCG GAGGCCTCGG CAGGACCGTG CGGAAACGGG CCTTCTGCCC AAAAGATGCT GCTTCTCTCC 000320 000321 TTATTCTTTC CCCTCAGAAT CTCGCTGTCT CCTTCCAACC ACCTGTGGTC GGCATCCCCG CGTTGTCACT GCGACGCAGA 000400 000401 GGCGAGCGAG GTGGCGGGAA GCACCCGCGG GGCGGGGAGG GACCCTGCGG GCGCGGACTC CACACCAAGC CTCTGCTCAG 000480 000481 CGTCACCCCG CTTGCTGTGT CCTCGCAGGT CGCAGCTTCA TGGCCTGATG CCTTCAGGAA GTATTTTGAA GTCATCGTGG 000560 000561 CTGTGGATTG GGGGATTTCT TGTTTCCACT GACCTGTGAG GCCGCGCACG TGGAGGGAGG CACCCCGGGT CCTCCGGCAC 000640 000641 TGTCCGGCCT CGCCTGTGTC CCTAGTAGCA GTGGGCATTT CCAGACGGTG CAGCTTGTGG CTAAAGTGAC AGGAAGATGT 000720 000721 AGGAGCTTTC AGTCTTGGAT GAGGATTCGA ACTGAAGGGC TTAGGCCCAG CTGTCTTGGA GCAAAACATC TGTTGTGGGG 000800 000801 TGAGAAGGGA AAGGAGGGGT GAGGGTGCAG GGGCCCTCCT AGGAGGACAT CGGACCTGTT GGGCCGAGAC CTCATTAGAG 000880 000881 ATCTAGAGCA CGGATGGGAG GAGCAGAGGC TCGATTTGTG TCCTGTTCAG ACTCCCACAG GCTGGGTGAT GGTGGGAGAT 000960 000961 TTGTGCCCAT TCAGATGTGG CGGCAGAGGA GGGCAAGGCC GAAGGAGCAG ACAGCACCGC TTCTTGGGGA GTTGTGAAGG 001040 001041 CATCATGCGG AGGGCCGAGC TTAGCAGCCA AGTGGAGGAC AGCACCCTCC ATGCCTGGAT TCGTTACTCG CTCGTTCTCG 001120 001121 ATGTTGAGCT GCTGGCATAT TGCAGCACAA CTAGAGATGT ACGGATGCCC CCATCTTGAT CTTACAGAAT CAGAGGTGCA 001200 001201 GCCGCAAGAA AGCTACACCC TCTCGGTTTT CTCTGCTCTG CCAACACTAG TGGAATATGA TCACATCCCA GGGATCAGTG 001280 001281 TCATTTAGGG ATGTGACTAT GGGCTTCACT CAAGAGGAGT GGCATCATCT GGACCCTGCT CAGAGGACCC TGTAGAGGAA 001360 001361 TGTGATGCTG GAGAACTACA GCCACCTTGT CTCAGTAGGG TATTGCATTC CTAAACCAGA AGTGATCCTC AAATTGGAGA 001440 001441 CAGGCAAGGA GCCATGGATA TTAGAGGAAA AATTTCGAAG CCAGAGTCAT CTGGGTGAGT TAGTGCCAGA TGGAATTTAA 001520 001521 AG |
Predicted Small Protein
Name | NONHSAT012894_smProtein_305:598 |
Length | 98 |
Molecular weight | 10307.7442 |
Aromaticity | 0.0618556701031 |
Instability index | 67.2742268041 |
Isoelectric point | 8.52471923828 |
Runs | 15 |
Runs residual | 0.0231004200076 |
Runs probability | 0.0251722310546 |
Amino acid sequence | MLLLSLFFPLRISLSPSNHLWSASPRCHCDAEASEVAGSTRGAGRDPAGADSTPSLCSAS PRLLCPRRSQLHGLMPSGSILKSSWLWIGGFLVSTDL |
Secondary structure | LEELEELLLEEEEELLLLLLLLLLLLLLLLLHHHHHHLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLHHHLLLLLLHHHHHHHHHHHLLEEEELLL |
PRMN | - |
PiMo | - |