NONHSAT012896
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT012896 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1284 nt |
Genomic location |
chr10-:43018630..43048236 |
Exon number |
6 |
Exons |
43018630..43018753,43019060..43019186,43046005..43046063,43047025..43047306,43047438..43047728,43047836..43048236 |
Genome context |
|
Sequence |
000001 CTCCGGTACA GCCTGGTAGG GAGGGCTCCC GGCATCTCCC TGCTTCGGGG CAGAGGATGC CGGGGGTAGA GTACGGGAGG 000080
000081 GCTGGAGCGA GGGTGGACTG GAGGTGCCGC TTGTCCTGGA GGTGGGAGAG AGGGAGCGGC TTTGCCGCCT GGCCTGCGTC 000160 000161 CTAATCCTGT CCTGGTTCTT CTGCTCCCGA AGGGAACGTA GGTCCCGCGC CTGTGATAAG TAAGGTTGGA TTTTCTCTTC 000240 000241 CCTGAGGTGA AGGATGCCCG GAGGCCTCGG CAGGACCGTG CGGAAACGGG CCTTCTGCCC AAAAGATGCT GCTTCTCTCC 000320 000321 TTATTCTTTC CCCTCAGAAT CTCGCTGTCT CCTTCCAACC ACCTGTGGTC GGCATCCCCG CGTTGTCACT GCGACGCAGA 000400 000401 GGTCGCAGCT TCATGGCCTG ATGCCTTCAG GAAGTATTTT GAAGTCATCG TGGCTGTGGA TTGGGGGATT TCTTGTTTCC 000480 000481 ACTGACCTGT GAGGCCGCGC ACGTGGAGGG AGGCACCCCG GGTCCTCCGG CACTGTCCGG CCTCGCCTGT GTCCCTAGTA 000560 000561 GCAGTGGGCA TTTCCAGACG GTGCAGCTTG TGGCTAAAGT GACAGGAAGA TGTAGGAGCT TTCAGTCTTG GATGAGGATT 000640 000641 CGAACTGAAG GGCTTAGGCC CAGCTGTCTT GGAGCAAAAC ATCTGTTGTG GGACTCCCAC AGGCTGGGTG ATGGTGGGAG 000720 000721 ATTTGTGCCC ATTCAGATGT GGCGGCAGAG GAGGGCAAGG CCGAAGGAGC AGACAGCACC GCTTCTTGGG GAGTTGTGAA 000800 000801 GGCATCATGC GGAGGGCCGA GCTTAGCAGC CAAGTGGAGG ACAGCACCCT CCATGCCTGG ATTCGTTACT CGCTCGTTCT 000880 000881 CGATGTTGAG CTGCTGGCAT ATTGCAGCAC AACTAGAGAT GTACGGATGC CCCCATCTTG ATCTTACAGA ATCAGAGGTG 000960 000961 CAGCCGCAAG AAAGCTACAC CCTCTCGGTT TTCTCTGCTC TGCCAACACT AGTGGAATAT GATCACATCC CAGGGATCAG 001040 001041 TGTCATTTAG GGATGTGACT ATGGGCTTCA CTCAAGAGGA GTGGCATCAT CTGGACCCTG CTCAGAGGAC CCTGTAGAGG 001120 001121 AATGTGATGC TGGAGAACTA CAGCCACCTT GTCTCAGTAG GGTATTGCAT TCCTAAACCA GAAGTGATCC TCAAATTGGA 001200 001201 GACAGGCAAG GAGCCATGGA TATTAGAGGA AAAATTTCGA AGCCAGAGTC ATCTGGGTGA GTTAGTGCCA GATGGAATTT 001280 001281 AAAG |
Predicted Small Protein
Name | NONHSAT012896_smProtein_710:940 |
Length | 77 |
Molecular weight | 8572.7441 |
Aromaticity | 0.0657894736842 |
Instability index | 63.0565789474 |
Isoelectric point | 8.93328857422 |
Runs | 12 |
Runs residual | 0.0164851784634 |
Runs probability | 0.0390022375316 |
Amino acid sequence | MVGDLCPFRCGGRGGQGRRSRQHRFLGSCEGIMRRAELSSQVEDSTLHAWIRYSLVLDVE LLAYCSTTRDVRMPPS |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLEELLLLHHHEEEEEELLLLLLLLEEEEEEEEEEELEE EEEEELLLLEEELLLL |
PRMN | - |
PiMo | - |