NONHSAT012900

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT012900

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1475 nt

Genomic location

chr10-:43018695..43048250

Exon number

4

Exons

43018695..43018753,43019060..43019186,43046005..43046063,43047021..43048250

Genome context

Sequence
000001 CCAGGTTTGT TTTTCTCCGG TACAGCCTGG TAGGGAGGGC TCCCGGCATC TCCCTGCTTC GGGGCAGAGG ATGCCGGGGG 000080
000081 TAGAGTACGG GAGGGCTGGA GCGAGGGTGG ACTGGAGGTG CCGCTTGTCC TGGAGGTGGG AGAGAGGGAG CGGCTTTGCC 000160
000161 GCCTGGCCTG CGTCCTAATC CTGTCCTGGT TCTTCTGCTC CCGAAGGGAA CGTAGGTCCC GCGCCTGTGA TAAGTAAGGT 000240
000241 TGGATTTTCT CTTCCCTGAG GTGAAGGATG CCCGGAGGCC TCGGCAGGAC CGTGCGGAAA CGGGCCTTCT GCCCAAAAGA 000320
000321 TGCTGCTTCT CTCCTTATTC TTTCCCCTCA GAATCTCGCT GTCTCCTTCC AACCACCTGT GGTCGGCATC CCCGCGTTGT 000400
000401 CACTGCGACG CAGAGGCGAG CGAGGTGGCG GGAAGCACCC GCGGGGCGGG GAGGGACCCT GCGGGCGCGG ACTCCACACC 000480
000481 AAGCCTCTGC TCAGCGTCAC CCCGCTTGCT GTGTCCTCGC AGGTCGCAGC TTCATGGCCT GATGCCTTCA GGAAGTATTT 000560
000561 TGAAGTCATC GTGGCTGTGG ATTGGGGGAT TTCTTGTTTC CACTGACCTG TGAGGCCGCG CACGTGGAGG GAGGCACCCC 000640
000641 GGGTCCTCCG GCACTGTCCG GCCTCGCCTG TGTCCCTAGT AGCAGTGGGC ATTTCCAGAC GGTGCAGCTT GTGGCTAAAG 000720
000721 TGACAGGAAG ATGTAGGAGC TTTCAGTCTT GGATGAGGAT TCGAACTGAA GGGCTTAGGC CCAGCTGTCT TGGAGCAAAA 000800
000801 CATCTGTTGT GGGGTGAGAA GGGAAAGGAG GGGTGAGGGT GCAGGGGCCC TCCTAGGAGG ACATCGGACC TGTTGGGCCG 000880
000881 AGACCTCATT AGAGATCTAG AGCACGGATG GGAGGAGCAG AGGCTCGATT TGTGTCCTGT TCAGACTCCC ACAGGCTGGG 000960
000961 TGATGGTGGG AGATTTGTGC CCATTCAGAT GTGGCGGCAG AGGAGGGCAA GGCCGAAGGA GCAGACAGCA CCGCTTCTTG 001040
001041 GGGAGTTGTG AAGGCATCAT GCGGAGGGCC GAGCTTAGCA GCCAAGTGGA GGACAGCACC CTCCATGCCT GGATTCGTTA 001120
001121 CTCGCTCGTT CTCGATGTTG AGCTGCTGGC ATATTGCAGC ACAACTAGAG ATGTACGGAT GCCCCCATCT TGATCTTACA 001200
001201 GAATCAGAGG TGCAGCCGCA AGAAAGGTCT CTACACCCTC TCGGTTTTCT CTGCTCTGCC AACACTAGTG GAATATGATC 001280
001281 ACATCCCAGG GATCAGTGTC ATTTAGGGAT GTGACTATGG GCTTCACTCA AGAGGAGTGG CATCATCTGG ACCCTGCTCA 001360
001361 GAGGACCCTG TAGAGGAATG TGATGCTGGA GAACTACAGC CACCTTGTCT CAGTAGGGTA TTGCATTCCT AAACCAGAAG 001440
001441 TGATCCTCAA ATTGGAGACA GGCAAGGAGC CATGG
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Predicted Small Protein

Name NONHSAT012900_smProtein_962:1192
Length 77
Molecular weight 8572.7441
Aromaticity 0.0657894736842
Instability index 63.0565789474
Isoelectric point 8.93328857422
Runs 12
Runs residual 0.0164851784634
Runs probability 0.0390022375316
Amino acid sequence MVGDLCPFRCGGRGGQGRRSRQHRFLGSCEGIMRRAELSSQVEDSTLHAWIRYSLVLDVE
LLAYCSTTRDVRMPPS
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLEELLLLHHHEEEEEELLLLLLLLEEEEEEEEEEELEE
EEEEELLLLEEELLLL
PRMN -
PiMo -