NONHSAT012900
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT012900 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1475 nt |
Genomic location |
chr10-:43018695..43048250 |
Exon number |
4 |
Exons |
43018695..43018753,43019060..43019186,43046005..43046063,43047021..43048250 |
Genome context |
|
Sequence |
000001 CCAGGTTTGT TTTTCTCCGG TACAGCCTGG TAGGGAGGGC TCCCGGCATC TCCCTGCTTC GGGGCAGAGG ATGCCGGGGG 000080
000081 TAGAGTACGG GAGGGCTGGA GCGAGGGTGG ACTGGAGGTG CCGCTTGTCC TGGAGGTGGG AGAGAGGGAG CGGCTTTGCC 000160 000161 GCCTGGCCTG CGTCCTAATC CTGTCCTGGT TCTTCTGCTC CCGAAGGGAA CGTAGGTCCC GCGCCTGTGA TAAGTAAGGT 000240 000241 TGGATTTTCT CTTCCCTGAG GTGAAGGATG CCCGGAGGCC TCGGCAGGAC CGTGCGGAAA CGGGCCTTCT GCCCAAAAGA 000320 000321 TGCTGCTTCT CTCCTTATTC TTTCCCCTCA GAATCTCGCT GTCTCCTTCC AACCACCTGT GGTCGGCATC CCCGCGTTGT 000400 000401 CACTGCGACG CAGAGGCGAG CGAGGTGGCG GGAAGCACCC GCGGGGCGGG GAGGGACCCT GCGGGCGCGG ACTCCACACC 000480 000481 AAGCCTCTGC TCAGCGTCAC CCCGCTTGCT GTGTCCTCGC AGGTCGCAGC TTCATGGCCT GATGCCTTCA GGAAGTATTT 000560 000561 TGAAGTCATC GTGGCTGTGG ATTGGGGGAT TTCTTGTTTC CACTGACCTG TGAGGCCGCG CACGTGGAGG GAGGCACCCC 000640 000641 GGGTCCTCCG GCACTGTCCG GCCTCGCCTG TGTCCCTAGT AGCAGTGGGC ATTTCCAGAC GGTGCAGCTT GTGGCTAAAG 000720 000721 TGACAGGAAG ATGTAGGAGC TTTCAGTCTT GGATGAGGAT TCGAACTGAA GGGCTTAGGC CCAGCTGTCT TGGAGCAAAA 000800 000801 CATCTGTTGT GGGGTGAGAA GGGAAAGGAG GGGTGAGGGT GCAGGGGCCC TCCTAGGAGG ACATCGGACC TGTTGGGCCG 000880 000881 AGACCTCATT AGAGATCTAG AGCACGGATG GGAGGAGCAG AGGCTCGATT TGTGTCCTGT TCAGACTCCC ACAGGCTGGG 000960 000961 TGATGGTGGG AGATTTGTGC CCATTCAGAT GTGGCGGCAG AGGAGGGCAA GGCCGAAGGA GCAGACAGCA CCGCTTCTTG 001040 001041 GGGAGTTGTG AAGGCATCAT GCGGAGGGCC GAGCTTAGCA GCCAAGTGGA GGACAGCACC CTCCATGCCT GGATTCGTTA 001120 001121 CTCGCTCGTT CTCGATGTTG AGCTGCTGGC ATATTGCAGC ACAACTAGAG ATGTACGGAT GCCCCCATCT TGATCTTACA 001200 001201 GAATCAGAGG TGCAGCCGCA AGAAAGGTCT CTACACCCTC TCGGTTTTCT CTGCTCTGCC AACACTAGTG GAATATGATC 001280 001281 ACATCCCAGG GATCAGTGTC ATTTAGGGAT GTGACTATGG GCTTCACTCA AGAGGAGTGG CATCATCTGG ACCCTGCTCA 001360 001361 GAGGACCCTG TAGAGGAATG TGATGCTGGA GAACTACAGC CACCTTGTCT CAGTAGGGTA TTGCATTCCT AAACCAGAAG 001440 001441 TGATCCTCAA ATTGGAGACA GGCAAGGAGC CATGG |
Predicted Small Protein
Name | NONHSAT012900_smProtein_962:1192 |
Length | 77 |
Molecular weight | 8572.7441 |
Aromaticity | 0.0657894736842 |
Instability index | 63.0565789474 |
Isoelectric point | 8.93328857422 |
Runs | 12 |
Runs residual | 0.0164851784634 |
Runs probability | 0.0390022375316 |
Amino acid sequence | MVGDLCPFRCGGRGGQGRRSRQHRFLGSCEGIMRRAELSSQVEDSTLHAWIRYSLVLDVE LLAYCSTTRDVRMPPS |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLEELLLLHHHEEEEEELLLLLLLLEEEEEEEEEEELEE EEEEELLLLEEELLLL |
PRMN | - |
PiMo | - |