NONHSAT013076
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT013076 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1614 nt |
Genomic location |
chr10-:45594924..45643337 |
Exon number |
7 |
Exons |
45594924..45595947,45602064..45602178,45602445..45602531,45611386..45611485,45637543..45637602,45642276..45642393,45643252..45643337 |
Genome context |
|
Sequence |
000001 AGCGTGGGTT CTAGAAGCTC ATCTAATGGC ATTACAAGTT TTAAATTCAC CATAGCAGCT TCTTCCTGAA ATCAGAAAGC 000080
000081 TTTTTTTCTG TCTGCAGCTG GAGTGCGATG GCATGATCTC GGCTCACTGC AACCTCTGCC TCCCAGGTTC AAGCGTTTCT 000160 000161 CCTGCCTCAC CCTCCCAAGT AGCTGGGATT GCAGGCATGC ACCACTGTGC CCAGGAAGCT GAGAGTGCTG AGGGCACATC 000240 000241 TGAAACCACT GGAGGTTGGC GACATGGAGG TCAGAACTGA AGAATTTGGA AGTGCTCAAA TTTTTAAATA ACCAGATCGA 000320 000321 GGAGCTGCCA ACACAGATCA GCAGGCTTCA AAAACTCAAA CACCTGAACC TTGGCCACCC TGTGTGCACT CTATCTAAGT 000400 000401 GACAACGGTT TTGAAATCCT GCCACCAGAT ATTGGGAAGC TCACAAAGTT GCAGATAGTA ACTCAGCAAT AGGGATAAAG 000480 000481 ACCTGATCTC ACTGCTTAAG GAAATTGGGG AGCTTACCCA GCTTAAAGAG CTCCACATTC AGAGGAACCG CCTCACTGTT 000560 000561 CTACGCCCAG AACTAGGCAA TGATGGGACC TCTTCTCCTG CATTTGTTAC CCAGATAATT TTGCCTTTGG AGAAGAGAAG 000640 000641 AAAATCACAT TGGTCTGCTC GGAATGCAAC AAAACAAAGT GTTATTGACA CCAAAACCTT ATTTGCACCA ATCCAAACAG 000720 000721 CCTATGGGAC ATATGTCTGC AATGCTGCAC ACACCTGGGG CTTGCCAGCT TAGTGCCCTA CGATATGTGC CAATAATCGA 000800 000801 TAGCATTTTT TACTACAGTA ATTATGAGAA GCATAGTATT TTCTAGCATG CTTGTGAAGA GTGGAAACAA ATATTAATCC 000880 000881 CCTTCAGAGA GTAAAGGACA TTATGAATTG AGAATTTCCT CCCAATTTAT TCTCCAGAAT GAACAGAATT AACAGTGAGT 000960 000961 GGATGTACGT CCAAAATTTC TTCTGTTATA TCTCTTAATC CTTTTCCTGC GGACATCGAG AAACTAAAGA AAAATAACTT 001040 001041 TCTTTACTGA GGCAGGCAAG AAGGAAATCC AGTATTCTTT GTTTGATCAA TTAAGTCTCT GTAAGTGTCT CATTTATCTT 001120 001121 CTCTTTTGTT ATTGTCACTC TGTCAACTGG TTCCCAATTA TTTTATCCAG AGGTTTAAAA CTTTTTTAAA TGTAAACAGT 001200 001201 AGAGAATAGA GGTTAAGTGC TGCACTCTTC ATCACTAGGC TTGGGTTCAA ACCTCACTCT CCCACTCCCT TGTTCTGTGA 001280 001281 CCTTCAGATA CTGATATGGT TTGAAAGGAA AGGAAAGGAA AAAACAGATC AAAATGTTTC AATAATCATG AACGTATATG 001360 001361 TATCTGATAA TGTACCCTTT ATTTATGCTC AATGAGATTT AACATGTTCA TCTCAGAAAG GGATAGATCA AGCTGCAAAA 001440 001441 AGTTTGCATA CATAGAAGAT CTAAATAGCA TGACTAACAA GTTTAAAATA TTAATGTAGA ATCATAAAAA TATAATTTTT 001520 001521 TCAAGCACAC ATATAATATT TGTAAAAATT GACCAGGTAC AAATCACATA GTAATTCTCA ATAAATTTTA GAAAAAGGAA 001600 001601 AAAAAAAAAA AAAA |
Predicted Small Protein
Name | NONHSAT013076_smProtein_1391:1498 |
Length | 36 |
Molecular weight | 4296.0465 |
Aromaticity | 0.142857142857 |
Instability index | 56.7685714286 |
Isoelectric point | 9.51275634766 |
Runs | 5 |
Runs residual | 0.0382566585956 |
Runs probability | 0.0246952835189 |
Amino acid sequence | MRFNMFISERDRSSCKKFAYIEDLNSMTNKFKILM |
Secondary structure | LEELLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHL |
PRMN | - |
PiMo | - |