NONHSAT013259
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT013259 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1318 nt |
Genomic location |
chr10-:49256241..49268060 |
Exon number |
9 |
Exons |
49256241..49256318,49258304..49258443,49259153..49259340,49259679..49259800,49260526..49260666,49261573..49261761,49265430..49265509,49266785..49266974,49267871..49268060 |
Genome context |
|
Sequence |
000001 GGTAAATAGC CACTATGGAG ACTAAGGACC AGAAGAAACA CAGAAAGAAA AACAGTGGAC CCAAAGCTGC AAAGAAAAAG 000080
000081 AAGTGGCATC TGCAGGATCT CCAGCTAGGA GACGAAGAAA ATGCCCAGAA GAGAAATGCC AATGCTTTTG CAGTTCAGTC 000160 000161 TGCTGTGTGG ATGTCTCGAT CCTTTCACAG GACTCTGGAT TTGAAGACAC AAAAGCATCA TATTCCAGTG GTTGATGGAA 000240 000241 CTCCACTAGA GCCGCCACCA ATACCGGTAG TGGTGACGGG GCCTCCAAAG TTGGAAAGAG CACTTTGATA TAATGCCTCA 000320 000321 TTCGGAACTT CACCTGGCAG AAGTTCACCG AGATCAGAGG CCCTGTGACG ATCGTGTCAG GTAAAAAGCG CAGACTCACC 000400 000401 ATTATTGAAT GTGGGTGTGA CATTAACATG ATGATTGATC TGGCTGAAGT AGCAGATCTG GTACTGATGC TTATAGATGC 000480 000481 CAGCTTTGGG TTTGAAATGG AAATGTTTGA GTTTCTAAAC ATCTGTCAAG CACATGGCTT TCCTAAAATT CTGGGAGTTC 000560 000561 TCACCCACCT CGACTCCTTC AAGCATAACA AGCAACTGAA GAAGACAAAG AAGCGATTAA AACACAGGTT CTGGACAGAA 000640 000641 GTTTACCAGG TTGCCAAACT GTTCTACCTT TCTGGAATGG TGCATGGAGA ATATCAAAAC CAAGAAATCC ACAATCTGGG 000720 000721 CCATTTTATT ACAGTTATGA AGTTTAGGCC TCTCATGGCA AACTTTTCAC CCTTATATCC TGGCAGACAG GATGGAAGAT 000800 000801 TTGACAAACC CGGAGGATAT CCAAACAAAC ATCAAATGTG ACCGGCAGGT GTCACTTTAT GGTTATTTAA GAGGAGCACA 000880 000881 CTTCAAAGAT AAAAGCCAAA TTCACATGCC AGGGGTAGAA CATTTTGCCA TGAGTGACAT CGGTTTCCTC CCAGACCCTT 000960 000961 GTGTTCTTCC TGAATAACAA AAGAAGTGCT GTTTAAATAA GAAGGAGCAG CTGGTTTATG TGCCTGTTTC TGGAGTTGAG 001040 001041 GGTGTGCTGT ATGACAAAGA CGCTGTCTGT GTTGACCTTG GTGGCAGCCA CGGTTTTCAG GACAAGGTGG GGCTCACCCA 001120 001121 TGAGCTGGTC CAGAGTCTCA TCTCCACCTA CTCCACCATT GATGCCAAGA TGGCTTCAAG TCGAGTGACG CTGCTTTCCA 001200 001201 ATTCCAAACC ACTTGGGTCA GAGGCTATAG ATAATCAAGG GCTGTTGATG CCAAAGGAGG AAAAACAAAT AGACTTGAAA 001280 001281 ACTGGTCGAA TGCGTCAGAA AGCCATTTTT GGAGATGA |
Predicted Small Protein
Name | NONHSAT013259_smProtein_14:307 |
Length | 98 |
Molecular weight | 11004.5914 |
Aromaticity | 0.0412371134021 |
Instability index | 56.2020618557 |
Isoelectric point | 10.1168823242 |
Runs | 11 |
Runs residual | 0.0181366933944 |
Runs probability | 0.045205633441 |
Amino acid sequence | METKDQKKHRKKNSGPKAAKKKKWHLQDLQLGDEENAQKRNANAFAVQSAVWMSRSFHRT LDLKTQKHHIPVVDGTPLEPPPIPVVVTGPPKLERAL |
Secondary structure | LLLHHHHHHHLLLLLHHHHHHHHHHHHHLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLL LLLLLLLLLLLLLLLLLLLLLLLLEEELLLLHHHLLL |
PRMN | - |
PiMo | - |