NONHSAT013427
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT013427 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
971 nt |
Genomic location |
chr10-:54210634..54215032 |
Exon number |
3 |
Exons |
54210634..54211277,54214346..54214509,54214866..54215032 |
Genome context |
|
Sequence |
000001 ATTCAAGATG ATGTTAGAGA GATGACAGAG TCTAGGTTAG GGAGGGCCTG AGTCCTTGTA GACTCTGAGT ACGGTGCTGA 000080
000081 GCAGGGAAGA GACAGGCTCT GGCTTAGGGT TTAGAAGGAA CACAGGCTAC TGCGATGAGG ATTGTCTGAA GGGGAACAAA 000160 000161 GGCCAAGATG TTGTTTGAAG CCGTGAGACT GAGTGAGATC ATGGAGGAAG TGAATGTAAA TAGAAAAGGG AAGAAGTCTG 000240 000241 AAGACGGAGC CCTGAGACAC TCCATTGTAA ACTGGAAGAT GAGGAAGAGC CAGCAAAGGA GACTGAGAAG GGGCAGCCAG 000320 000321 TGAAGATGGA GCCAGGGCTA GAGTAAGAGC CCCTTCTGGG ATGCTGTGAC CCCCAAGTTT GAAGACTGCT GATAACCCCA 000400 000401 ATCTACGAAG ACTAGCTATG GAACTTCCTA CACTGAGACA ACTCCAGTGG AACTCTGATA ATTATCCTAA AATAAGGAGG 000480 000481 CTTCTTCAGT AGCCCTCGAA ATATGTTCAA ATACATGATT ACATTTATGT CCTTAATATT GCTATTAGTT TCTGATGTTA 000560 000561 ATGTAAAAGT TGGGGAAAAA GTGGAAAAGT TAAAGCAGTG CAGGTTAATT CAATGCCAGA GTAACTTCTC AGAGGGTGTA 000640 000641 TATTCAGTGT GAACAATTTT CAACAGAGAA ATGTCAACTT CTGGCCACAA CGGCAACCAG TAAAATGACT ATTTTTACTG 000720 000721 TCTTATCTAT TAATGAAGAG GAGATTGCAT AATATAGATG AAGGAGCATA GTATTTGCAG GTGGAACGCC TAGCAGGGCT 000800 000801 TGAGTCTCAA CTCTGCTGCT TTTACTCTAA TTGACCGAGA CAAGTCATTT AAACTAATAG AGCTTCAATT TTCTCATATC 000880 000881 TAATGTAACA TAACAATTCA CAGCCTTTTA CTTTGTAGTT ATCGTGAAGA TCTAATCGCA GTGAAATATA TTTATATATC 000960 000961 TGTCTGCTGA T |
Predicted Small Protein
Name | NONHSAT013427_smProtein_167:322 |
Length | 52 |
Molecular weight | 6083.992 |
Aromaticity | 0.0392156862745 |
Instability index | 70.9803921569 |
Isoelectric point | 11.2697143555 |
Runs | 10 |
Runs residual | 0.0418365365948 |
Runs probability | 0.0334128245893 |
Amino acid sequence | MLFEAVRLSEIMEEVNVNRKGKKSEDGALRHSIVNWKMRKSQQRRLRRGSQ |
Secondary structure | LLEEELLHHHHHHHHHLLLLLLLLLLLLEEEEEEHHHLHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |