NONHSAT013482
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT013482 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
709 nt |
Genomic location |
chr10+:59742045..59742753 |
Exon number |
1 |
Exons |
59742045..59742753 |
Genome context |
|
Sequence |
000001 TCCTAGAACA GAAAACACAG CTGTTGACCC AGACTGGGCT AGTCTTCTCC CTGTTGCAAC ACCATTTAAA TCTTTCAAAG 000080
000081 CTCCTTTCAA AGCACTTGAA ATGGGTATTT TGACCCTAGA AAGGGGGTTC TATGACAAAG GAGGGAAGCC AAAACTTAAA 000160 000161 TATTTCTGGC TTTCTACATT TGGCATGTGA TTTCTGCACT GAGTGGCCAG CAGCATCAGA CTTGTGAGAA ATATGAGTAG 000240 000241 CACTGCCCAA TTAAAACTCA TTTAACTGAT TATGTTTCAG CAGAATTATC CATTCAAAAT CCCAAAGTAG AGTAGGAACC 000320 000321 TTATCGAGTA AACTTTCCAA TCTGAATTTA AGTGATCATG TGAAGAAAAA ATATACTAAA CTTGCAAGAG AGCAATACTT 000400 000401 TAAGACCACA GAAATGTTCA CCAGCAAAAC GACAGAATTA TGATTATGCA ATTTATCCAC TCACAGTTTC ATACCTTGAA 000480 000481 TCTTAAACCA GAGAGTAAGA GAAAAAAGAT GGAAGCACAT GGGAAGGAAT ATCTATGAAA AACAGTTCAT AAAAGaaaaa 000560 000561 tataaaaaaa tttacaaatt aaaGCTACTG ATAAAAACAA AAAAAGAACA CTATTGTTCT AAACAAGGAT CACAAAATAT 000640 000641 CTGTTCATTT TAAGAATGAG AAGAAGGATA AAAATAGCAT GTCTAAGTAC AAAGAATCAG TGGAAAGGA |
Predicted Small Protein
Name | NONHSAT013482_smProtein_518:652 |
Length | 45 |
Molecular weight | 5387.3918 |
Aromaticity | 0.136363636364 |
Instability index | 40.9409090909 |
Isoelectric point | 9.85272216797 |
Runs | 8 |
Runs residual | 0.0187165775401 |
Runs probability | 0.0363230877937 |
Amino acid sequence | MGRNIYEKQFIKEKYKKIYKLKLLIKTKKEHYCSKQGSQNICSF |
Secondary structure | LLLLLHHHHHHHHHHHHHHHHHHHHHHLHHHEELLLLLLLEELL |
PRMN | - |
PiMo | - |