NONHSAT013596
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT013596 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
772 nt |
Genomic location |
chr10-:64952870..64954454 |
Exon number |
2 |
Exons |
64952870..64953232,64954046..64954454 |
Genome context |
|
Sequence |
000001 TAGAAGATTA GCTACAAAGA TAGAGGTCAC TAATAATAAT GACTGGTAAT TTTTAGAAAG GCTATCATTA TATCCATTTT 000080
000081 GTGTCAGTGT TTTTATAAAA TCAGGAAATG GTGGAACTGT TTTTCCTGAC TTGTTTCAGA ACCAAACATC TAAAGCATAT 000160 000161 CATTGACATT TTATTTCATT ATTTTTATTT TTTTCTTTTT CTCTTTGGCT GTGACTCTAG CCAACTATGA AACATTTTAT 000240 000241 ATAATCGTTA AGTTCTTTAC ACTATCAATT TATAATTATG AAACCATGAG TGTGATATAC AAGTTTTATT ATCTTACAGA 000320 000321 TAAAGAACTA TATGCTTGGA TGAAGTGTGT GAAGGGACAG CCTCATGATC ACAAACATTT AATGCCAACC CAAATTATAC 000400 000401 CTGGTTCTGT TTTGACAGAT CTTCTAGATG CCATGCACAC TCTTAGGGAA AAATATGGTA TTAAATCCCA TTGTCATTGT 000480 000481 ACTAACAAAC AGAATTTACA AGTTGGAAAT TTTCCTACAA TGAATGGTGT ATCTCAAGTG AGTAAAAATC TCTGGTTATT 000560 000561 CAAATAAAAT CTGTGGTTAA ATTAGTCAAC TTTGATATTT ATTTGAAATT TGGTTTAGGA CTTATGTATG AATTAGGTTT 000640 000641 GCTGTGTTTC TGTGTAAATT TTTTGTATCT ATACTACTAA TTGAATTATT GAAGAAAGTG TTTAAAAATG TAATTGTTCT 000720 000721 ACCTTTGTAG GTTTTACAGA ATGTTCTTAA TCACAGTAAT AAAATTTCTC TG |
Predicted Small Protein
Name | NONHSAT013596_smProtein_107:229 |
Length | 41 |
Molecular weight | 4981.8946 |
Aromaticity | 0.275 |
Instability index | 61.82275 |
Isoelectric point | 6.80072021484 |
Runs | 4 |
Runs residual | 0.0780241935484 |
Runs probability | 0.0434552199258 |
Amino acid sequence | MVELFFLTCFRTKHLKHIIDILFHYFYFFLFLFGCDSSQL |
Secondary structure | LEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLL |
PiMo | iiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooo |