NONHSAT013636
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT013636 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1227 nt |
Genomic location |
chr10+:67330208..67441224 |
Exon number |
7 |
Exons |
67330208..67330303,67331183..67331337,67332693..67332814,67345243..67345325,67345423..67345560,67375394..67375519,67440718..67441224 |
Genome context |
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Sequence |
000001 gcactggagt gaaaatacag aagttggtgc cctttgcagc agccaggagt ccgactcctc ctcttcctgt gtggaacctg 000080
000081 gaattcaaac ggctggGGCC TCACTCACgg catatggaac taaccacgcc cctaactaag aaggcacacc ttagttgcag 000160 000161 ttagcacaca attaaagcaa ctctccaagt tttaccttaa agttcaaaat tgctaggagt tgaaactact agaaatatat 000240 000241 ttacatgcaa gagtcaaaga aactttgaac tatttatggc ctttaataat taagtaaggt atactcctgt gatcaagact 000320 000321 tggagcatat ttgtttctct ctgcctggtt cctctagaaa ttggaaacta tcaGAACAGA GACCAACTCC GTTTCCCGAT 000400 000401 CCCTTTGCAA TCTGCATTGA ACCATGAGTC AAGTTCTTGA TAAAGGAGTG AAAATGGATG ACATTTAAGG CACATCTGAA 000480 000481 GATGGGGAAA CCACAGCACA GAATAAGGCT GGGCCCTTGA ATCAATAAAT GAAGGAGAAC TACTCAAGAG AACAAAACCA 000560 000561 CCAGCAATAT CCACCTGTAT TTGTCTTTTC ATAATGTGTG ACACATGTGC TCATGGATTA TTGTCCGAAG CAAGACATGT 000640 000641 GACCAAGCCT AACATCAACT GGGTGAAGAG CTATATGTTC CTTTCTCAAG AGGCACTACA AGTGACATGC CACTGGGCAG 000720 000721 atggagtctc gctctgtcac ccaggctaga gtgcagtacc gcaatctcgg ctcgctgcaa gctctgactc ccaggttcac 000800 000801 accattctcc tgcctcagcc tcccaagtag ctggcactac aggcgcccac caccatgcct ggctaatttt ttatattttt 000880 000881 agtagagaag gggtttcgcc gtgttagcca gaatggtctt gatctcctga cctcatgatc tgcccacctc ggcctcccaa 000960 000961 agtgctggga ttacaggcgt gagccaccgc gactggccTA ACATATTTTT AAAACCTGCA GAATGTTTGT ATTACTTTTG 001040 001041 TCATAGTACA TAACATTTAA ATGGATTTCT TGTTTGTGTA TGTGTGTATA TTCATTCACA ACACTGATAG TTTTTCTGAA 001120 001121 TATTTCCTTT GGATTTTATT CTTTTCTCAT TCAACTAAAT AAGAACCTGC ACCATCTTTT TCTAGTGTAA AAATTACAAT 001200 001201 ATCTGAAGTG AAACTACTAG AATAAAT |
Predicted Small Protein
Name | NONHSAT013636_smProtein_593:748 |
Length | 52 |
Molecular weight | 5686.486 |
Aromaticity | 0.078431372549 |
Instability index | 42.1588235294 |
Isoelectric point | 6.36688232422 |
Runs | 9 |
Runs residual | 0.0222286934576 |
Runs probability | 0.0361832420657 |
Amino acid sequence | MCDTCAHGLLSEARHVTKPNINWVKSYMFLSQEALQVTCHWADGVSLCHPG |
Secondary structure | LLLHHHLLLLLHHHHLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLEELLLL |
PRMN | - |
PiMo | - |