NONHSAT014068
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT014068 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
overlapping(S),sense |
Length |
2311 nt |
Genomic location |
chr10+:76672544..76944815 |
Exon number |
3 |
Exons |
76672544..76674615,76944584..76944672,76944690..76944815 |
Genome context |
|
Sequence |
000001 CTATAGTCAA GCTAATGACC CATGTAGATG TAGTGTTGTA CCTGGTGTCC GTGTCCCTGT GAATGTGTCA TGTTGTGCTG 000080
000081 GCCTGATTCC CCAACATCAG CCCCAGGGAG CCAGCAGCTG GAGCAGCTGT CATCTTGTGA AAGCAGAGTG TCCTTGTTGC 000160 000161 TATTGATTGG GTTGTTCAGT CAATTGCAAA AAAAGTGGAT CTAACTGTCA ATGGTAGTTA TATGATAATC CTGGAGATAA 000240 000241 ATAAGTGTCA AGTGAAGTAT TACTTGAATT TAGGACCTGA AGAGAGAGAA AGGGGTATGA GTAGTTGGAG GGGAAGATTT 000320 000321 GCTATGACAA GCTATTATTC AGTGTGGTTA TTTTGTATGA CAGGTAAGTC TACAGGTATC TTTTGTTAGA TAAACCAGAA 000400 000401 ATTAAGCATT CCCTTTGTAA ACTCCAAACA AGATTTTGAA ACACCATGGT CCCCCCTTAT CCACCTCCAA GATCTCCAGT 000480 000481 GGATGTCTGA AACCACTGAT AGTACTGAAG TCTCTATATA TTATGTTTTT CCCCTGTATG TAATACATAC CTGTGATAAA 000560 000561 GTTTAATTTA TAAATTAGGC ACAGGAAGAA ATTAACAAAA ATAAGTAAGA ATAGAACAGT TATAACTATA TGTTCTATTA 000640 000641 AAAGTTATGT GAATTTGTTT TCTGTCTCTC TCAAAATATC CTGTTGTGCT GTGTGTTCAC CCATTTTTGA GCTGCCGTTG 000720 000721 ACTGTGGATA ACAAACCACA GAAAGTGAAA CTTCACATAA AGGGGGACTA CTGTATTCTC ATAATGTTAA TTGCTTCTAG 000800 000801 AATTCACAAG GATTGAATTC AACTTGAATC TTGCTAAAGA AGTACTTTAT TATTCGATGT TAGTCCAGCA ACAACTTATA 000880 000881 GTGTAGAAAT TTGCCCTTTT GAGGGTGAAT ACACAAAGGT GAAAGAAAAC TTGTGTGCCC ACGGTCCACT AACAGATAAG 000960 000961 CTTCTGGAGG CCAGGAGTAA ACCGCCCTGC AGGGGAGCCA TCTCCCAGGG TTTCCCCAGC AGAGAGCTGT GCCCAGTGCC 001040 001041 GGGGTCTCAT GCTTACCTAT TTCTCTGTGC CAGTATAGTA GACCTGTTTT CAAGCCTGGC ATGAGCCTTA AGTATTACTG 001120 001121 GCTGGGAGTG GTGGCTCATG CCTGTAATCC TAGCACTTTG GGAGGGTGAG GCAGGCGGAT TGCCTGAGCT CAGGAGTTTG 001200 001201 AGACCAGCCT GGGCAACATG GTGAAACCCT GTCTCTACTA AAATACAAAA AATTAGCCGG GCGTGGTGGC GGGCACCTGT 001280 001281 AGTCCCAGCT ACTTGGGAGG CTGAGGTAGG AGAATTGCTT GAACCCAGGA GGCAGACATT GCAGTGGGCT GAGATCACGC 001360 001361 CAGTGCACTC CAGCCTGGGT GACAGAGCGA GACTCTGTCT CCCACAAAAA AAAGAAAAAA AAAAAAAGTA TTACTTATTT 001440 001441 AGTAAGTCCA TAGCATTTTG TTCACACAGT GTATCATTGT GCTTTTCTGT TTCAAAGTGT AATTATTTAA TCTAGAAATT 001520 001521 TTAAGTCCTG TGACAGAAAA CAAATGCTGT TCTCACAAAA TATGAGAAAT CAAATTCCAT CTTATTATTT AAATTAATTC 001600 001601 TTTTTTAACT GAAGAATTGT TATGTGGGTA GCTTTCAACA TAATTTTTTC AATATTAGAT GCTTATAACT AATGTGGATT 001680 001681 TAGTTAATTC GATGTTTATC ACATTTAATT CTTATTTACT ACAAAGGTTA AAGCAATTTT ATTTCTTCTG GAAACTTTTA 001760 001761 GGATCTTGTG AGTGAGGGAC GTCAGCCAAA ATTGGCAACT TTTTCAAGCA ACTGGCTCAA GAAATTAGGA ATTTCTCTAA 001840 001841 TAATGAGCCA TCGTTTTTTG AATTCAACAA TTTAAAAGGG CTGTATAGTT AGGATATGAT TCCAGTTTCC CCTCAGTGCA 001920 001921 AATTGATATT TTTTTCTGTT GACACATTCT ACTTTGTTTT CGAAGACTAG TTTATAGTGT TCTTTTAAAA GCAAAGAAAA 002000 002001 TATCTTTAAA AATCCCAGCT TTTTGGCTGG GTGCGGTGGC TTCATGCCTG TAATCCTAGC ACTTTGGGAG GGTGAGGCAG 002080 002081 GCGGATTGCC TGAGCTCAGG AGTTTGAGAC CAGCCTGGGC AACATGGTGA AACCCTGTCT CTACTAAAAT ACAAAAAATT 002160 002161 AGCCGGGCGT GGTGGCGGGC ACCTGTAGTC CCAGCTACTT GGGAGGCTGA GGTAGGAGAA TTGCTTGAAC CCAGGAGGCA 002240 002241 GACATTGCAG TGGGCTGAGA TCACGCCAGT GCACTCCAGC CTGGGTGACA GAGCGAGACT CTGTCTCCCA C |
Predicted Small Protein
Name | NONHSAT014068_smProtein_221:388 |
Length | 56 |
Molecular weight | 6496.5827 |
Aromaticity | 0.163636363636 |
Instability index | 40.7890909091 |
Isoelectric point | 8.95709228516 |
Runs | 11 |
Runs residual | 0.0484848484848 |
Runs probability | 0.0400186282539 |
Amino acid sequence | MIILEINKCQVKYYLNLGPEERERGMSSWRGRFAMTSYYSVWLFCMTGKSTGIFC |
Secondary structure | LEEEEELLEEEEEEELLLLHHHLLLLLLLLEEEEEEEEEEEEEEEELLLLLLEEL |
PRMN | - |
PiMo | - |