NONHSAT014099
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT014099 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1636 nt |
Genomic location |
chr10+:77056141..77121436 |
Exon number |
4 |
Exons |
77056141..77056409,77118268..77118465,77118697..77118807,77120379..77121436 |
Genome context |
|
Sequence |
000001 GAGTGGCATC AGGATGTCTG AGAGGAGAGC ATGGTGTTTT TGCTTCATTG GATCCATGCA GGTCTTGGAG GGTGGTGGCC 000080
000081 CACTCTTTCT GGGCCAAGTA GAGGGTGGCT CAGACACCCC CCCTTCCTCC AGGCTTCTCA TCTGTAACTG GTGAAGCCCG 000160 000161 GAAGAGCTTG TTGTTCAAGA GGAAATCTTG TGTTACTTCT TTATGAAGGA CTCCAGCCTG GTGGAGATGA ATGAGTCCTG 000240 000241 AAGATGGAAT CGAAGCTGTT TGGGCACAAT ACTTTAATCA GCATTTAATG ACCCAGTCGA AAATTCATTG TTTGGACCCA 000320 000321 AGCACTGGTG GGAAAGGCAG GAGGGGAGGC CTGCCTTCCT TCCTCCCTCC CGAGCCCTAC AGCAGGCCAT GGAGTGGTGA 000400 000401 GCGAGTTCGT ACAGTGCCAA CCACATTCCC AGAAACTTCC AGCAGAGGTT AATCCTGCTC CTCTCAGGAA AAAGTGATTC 000480 000481 AGCTCCGGTC CACCCTGGGT GCAGCGGTCC TTCTGCCAAG ATGCCTTCAT ATCATACAGC TATTATTTTC GGGAGGATTC 000560 000561 CAAGTGAGGG CAGTCAGGGT GGGCTTGGCC CATTCTCTAG ACTTTGGAAG GTAATGTTCT ATAGAGGCCT GTTCTGAAGC 000640 000641 TTTACCAGGT CAAACCGGAG AAGAACCCAA CAAGTAACTC ATCCCAGCCT AACTATTCTT CAAGGGCAAT CAACCTACAG 000720 000721 CATCCAAGCA CAGAGAAATC AAATCCATGG AGAATCTTCA AATTAGGCTC AGAATCCATT TGGGTCAATG AATTTACTGT 000800 000801 TATTAAGATC TTAGTTGTGT TCAACCATGA TTTGACATAC CTTAGAGTGA GAAGATATTC TTCCTGGCCT CAGACTAGTT 000880 000881 GAAGGTAGAG AGAGAGACAG GCCCTTGGGT GTGGGGAGAC CTCTCCTGGG ATAATACACA CAAAAAACCA AGAGCTGCTC 000960 000961 ACTGTGGTGC AGGAGACAGC AGGGCCTGAA GCCAGAGGCT CTGTGTCCTT GAATACAATG TTTTACTCCT CTGACCCCTG 001040 001041 TTACTGTGAT TTGGAGAGGC AGACAATATA GGATGGGCTT TGCAGGCAGG GAGGTCCAGT TATAATCCCA GCTCTTACTA 001120 001121 AGTTGGGTAA GACTCACTCT GAGACTTAGT TTCTTCTGTC ATCTCTCAAT AGAATCATAA AGGTACTTTC CTCTTAGTGT 001200 001201 TGTTTTAAAA TTCAGTAAAA TAATGCAGGC TTAGCACAGG GTCTGATGTA AATTTTCAAT GAATTATCGT TGTCAATATT 001280 001281 GTTCTGGAAA ACAAGAGGGC ATATTAGAAG ATCAAAAGTA CTGCCAAGCA TTGAAGTGCC AATTCTAGAT CCAGTCTCAG 001360 001361 CCCTCTGAGA ATGGATATCA TTGTTTTCAA GCCATTCAGA AACCAATGTG AATTGAACAC CTAGTATGAG CTCTCTGAGG 001440 001441 GAAGAGCCAA GTCATGCATT TTTTATCTTA AGGGGTCTTC AATACCTCTA GCCCAAAACA GTATCTCCAT CAGGATTCTT 001520 001521 CTCTGATAGT GTTCATTTCT TTTTTCTCAA TGGATGCCTT AAAAAAAAAA TCCTACAAGG AAACCTGTAC TCCTCAAATA 001600 001601 CACCACTCAG GTGACCATTA AATCATTTAC ATTGTT |
Predicted Small Protein
Name | NONHSAT014099_smProtein_230:451 |
Length | 74 |
Molecular weight | 8117.9936 |
Aromaticity | 0.0958904109589 |
Instability index | 77.5068493151 |
Isoelectric point | 7.96209716797 |
Runs | 7 |
Runs residual | 0.0482545293858 |
Runs probability | 0.0306356776946 |
Amino acid sequence | MSPEDGIEAVWAQYFNQHLMTQSKIHCLDPSTGGKGRRGGLPSFLPPEPYSRPWSGERVR TVPTTFPETSSRG |
Secondary structure | LLLHHHHHHHHHHHHHHHHLLLLEEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEE ELLLLLLLLLLLL |
PRMN | - |
PiMo | - |