NONHSAT014100
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT014100 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1525 nt |
Genomic location |
chr10+:77056141..77121436 |
Exon number |
3 |
Exons |
77056141..77056409,77118268..77118465,77120379..77121436 |
Genome context |
|
Sequence |
000001 GAGTGGCATC AGGATGTCTG AGAGGAGAGC ATGGTGTTTT TGCTTCATTG GATCCATGCA GGTCTTGGAG GGTGGTGGCC 000080
000081 CACTCTTTCT GGGCCAAGTA GAGGGTGGCT CAGACACCCC CCCTTCCTCC AGGCTTCTCA TCTGTAACTG GTGAAGCCCG 000160 000161 GAAGAGCTTG TTGTTCAAGA GGAAATCTTG TGTTACTTCT TTATGAAGGA CTCCAGCCTG GTGGAGATGA ATGAGTCCTG 000240 000241 AAGATGGAAT CGAAGCTGTT TGGGCACAAT ACTTTAATCA GCATTTAATG ACCCAGTCGA AAATTCATTG TTTGGACCCA 000320 000321 AGCACTGGTG GGAAAGGCAG GAGGGGAGGC CTGCCTTCCT TCCTCCCTCC CGAGCCCTAC AGCAGGCCAT GGAGTGGTGA 000400 000401 GCGAGTTCGT ACAGTGCCAA CCACATTCCC AGAAACTTCC AGCAGAGGTT AATCCTGCTC CTCTCAGGTG GGCTTGGCCC 000480 000481 ATTCTCTAGA CTTTGGAAGG TAATGTTCTA TAGAGGCCTG TTCTGAAGCT TTACCAGGTC AAACCGGAGA AGAACCCAAC 000560 000561 AAGTAACTCA TCCCAGCCTA ACTATTCTTC AAGGGCAATC AACCTACAGC ATCCAAGCAC AGAGAAATCA AATCCATGGA 000640 000641 GAATCTTCAA ATTAGGCTCA GAATCCATTT GGGTCAATGA ATTTACTGTT ATTAAGATCT TAGTTGTGTT CAACCATGAT 000720 000721 TTGACATACC TTAGAGTGAG AAGATATTCT TCCTGGCCTC AGACTAGTTG AAGGTAGAGA GAGAGACAGG CCCTTGGGTG 000800 000801 TGGGGAGACC TCTCCTGGGA TAATACACAC AAAAAACCAA GAGCTGCTCA CTGTGGTGCA GGAGACAGCA GGGCCTGAAG 000880 000881 CCAGAGGCTC TGTGTCCTTG AATACAATGT TTTACTCCTC TGACCCCTGT TACTGTGATT TGGAGAGGCA GACAATATAG 000960 000961 GATGGGCTTT GCAGGCAGGG AGGTCCAGTT ATAATCCCAG CTCTTACTAA GTTGGGTAAG ACTCACTCTG AGACTTAGTT 001040 001041 TCTTCTGTCA TCTCTCAATA GAATCATAAA GGTACTTTCC TCTTAGTGTT GTTTTAAAAT TCAGTAAAAT AATGCAGGCT 001120 001121 TAGCACAGGG TCTGATGTAA ATTTTCAATG AATTATCGTT GTCAATATTG TTCTGGAAAA CAAGAGGGCA TATTAGAAGA 001200 001201 TCAAAAGTAC TGCCAAGCAT TGAAGTGCCA ATTCTAGATC CAGTCTCAGC CCTCTGAGAA TGGATATCAT TGTTTTCAAG 001280 001281 CCATTCAGAA ACCAATGTGA ATTGAACACC TAGTATGAGC TCTCTGAGGG AAGAGCCAAG TCATGCATTT TTTATCTTAA 001360 001361 GGGGTCTTCA ATACCTCTAG CCCAAAACAG TATCTCCATC AGGATTCTTC TCTGATAGTG TTCATTTCTT TTTTCTCAAT 001440 001441 GGATGCCTTA AAAAAAAAAT CCTACAAGGA AACCTGTACT CCTCAAATAC ACCACTCAGG TGACCATTAA ATCATTTACA 001520 001521 TTGTT |
Predicted Small Protein
Name | NONHSAT014100_smProtein_230:451 |
Length | 74 |
Molecular weight | 8117.9936 |
Aromaticity | 0.0958904109589 |
Instability index | 77.5068493151 |
Isoelectric point | 7.96209716797 |
Runs | 7 |
Runs residual | 0.0482545293858 |
Runs probability | 0.0306356776946 |
Amino acid sequence | MSPEDGIEAVWAQYFNQHLMTQSKIHCLDPSTGGKGRRGGLPSFLPPEPYSRPWSGERVR TVPTTFPETSSRG |
Secondary structure | LLLHHHHHHHHHHHHHHHHLLLLEEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEE ELLLLLLLLLLLL |
PRMN | - |
PiMo | - |