NONHSAT015230

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT015230

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

1582 nt

Genomic location

chr10-:81903200..81907928

Exon number

2

Exons

81903200..81904554,81907702..81907928

Genome context

Sequence
000001 agagacaagt cctggaattg gcattcccaa gaaccatttg gtgctttact gtcctgtggt tgagctggta tctaaggtgt 000080
000081 aagacaaagc ccactttact tttccctcca cttttctcta gcaggaatct tgccttgtaa ccaccacagc tgggaatgtg 000160
000161 ctggctgaat ctgaacctga aaccgacaag accgagtctc acccaaggcc ctcagcatag tacccagGAA CTACTGCGCG 000240
000241 CGGGACACAA GGATCAAGGA GAGAGCAGAG TGCAACCCCA ACCCTGCCTG ATCAGTGGGG ACGCCCGTCT TCCCTGCGAG 000320
000321 AGTTTTGGGG TGGAACAGGA GTGGCTGCTC AGGGGAAAAT TAAAGGAGCT GAGAAGCTCC AGTCGTGAGA AGGCTAATGA 000400
000401 AGGAGGCAGT TTCTCCGCGC AGGGGTTGTG CTGAGATGGC ATCTAGGGCC GGCTCTTCCA GAACCTCATT TGACACTGGG 000480
000481 CGGCAGCCAC CGGGTGTGGC AGGTGGGGCG GGGCGGGCGG GGAGCAGGGA TGATGCCGTC CCGCTTCCGT CCCCAGGGAG 000560
000561 CGCTGGGGCC CTCCCTGCCA GCCAGGCTAC ACCTGTGCAG TGGAGCAGCC GTCCCTGTCT CGCCTGCCCA GCGCCAGATG 000640
000641 ACAGCCGCCC AGAGGCTGTC CTCTGCCACC TGCACTGCTC ACCTCCGAGA AGGTCGGGAG CGGGGCTGAA GGGTCCCGGG 000720
000721 GGCAGGTTCC AGGCCAGCTC CTCCAGCAGG CCCAGCAGGC CTTTCACCTC TGTCCCCAGG TGATCCACGG TCTTCTCTAC 000800
000801 CATCTAGAGT GGGAAGTGGG GTAAAGTCGA GGACAGAAGT GGTTCCACGT TCCGCTTCAT CAGCTAGGTC CTAAGAGAGC 000880
000881 AGCTGGCGGT CCAGTGCGGT GCAGTGGGAA AGGACTGGGC GCTAAGTGAC CTGGGTTTTC CTCACTCAGG CTCTGCCCCT 000960
000961 ACCTGCCTCA GTTTCCCCAG ATGACAATAT CCTAGGGGGC TTGCTCTCTA AGGCTCCTTC TTTTTTGGCA CTTAGTCACA 001040
001041 GATTTGGATG AAGCGCCTGT AGAATACCTT CTCCCTTTTG GACTTTGCAG CCTGGAGCTC ACATTCCTTT TGTTGTTCCG 001120
001121 CCCCCTGGTG GTATCTCTGC CAAATGACAG GTTTGGGATT CTGAAATTTA CTGAGTTCTT AATggttttt ccctgtgtat 001200
001201 gccatggacc ccattggcag tgtggtgaag cctacagacc tcttctcaga ataatgcctt aaatgcaaaa aataaaacat 001280
001281 atagaattac taagggcacc aattgcatta aaatattatt caagtattag gccgggcgtg gtggctcacg cctgtaatcc 001360
001361 cagcactttg ggaggccaag gggggcagat catcggaggt caggagttca agatcagcct agccaacgtg gcgaaaccct 001440
001441 gtctctacta aaaatacaaa aagaagccgg gcatggtggt gcgcgtctgt agtctcagct actcgggagg ctgaggcaag 001520
001521 agaatcactt gaaccgggag gtggaggttg cagtgagccg agatcacacc attgcactcc ag
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Predicted Small Protein

Name NONHSAT015230_smProtein_155:433
Length 93
Molecular weight 10204.4361
Aromaticity 0.0434782608696
Instability index 54.5434782609
Isoelectric point 8.46173095703
Runs 13
Runs residual 0.00609946825149
Runs probability 0.0456836927426
Amino acid sequence MCWLNLNLKPTRPSLTQGPQHSTQELLRAGHKDQGESRVQPQPCLISGDARLPCESFGVE
QEWLLRGKLKELRSSSREKANEGGSFSAQGLC
Secondary structure LEEELLLLLLLLLLLLLLLLLLHHHHHHHLLLLLLLLLLLLLLEEEELLLLLLLLLLLHH
HHHHHHLLHHHHLLLHHHHHLLLLLLLLLLLL
PRMN -
PiMo -