NONHSAT015490
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT015490 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
625 nt |
Genomic location |
chr10+:90751185..90770417 |
Exon number |
4 |
Exons |
90751185..90751383,90762786..90762951,90767457..90767594,90770296..90770417 |
Genome context |
|
Sequence |
000001 GGCAGTTCTC AGACGTAGGA AATAAGTCAG CACCGAAGCA GTGGTTAAGC CGGAGGGCTC GGAAGAACGG CACCTTTTCT 000080
000081 TTCTCGAAAA AGTTATATGG GGGCTGAATG AGCTTCTGGA GGCTTGTTTA CCGTTTTTTA TTGTCACACA GAAAAAGAAA 000160 000161 CTGCCTTGTC TCCCTTCCGG GAATTCTCTC TTTAAGACTG TTCTTACGTC TGTTGCTAGA TTATCGTCCA AAAGTGTTAA 000240 000241 TGCCCAAGTG ACTGACATCA ACTCCAAGGG ATTGGAATTG AGGAAGACTG TTACTACAGT TGAGACTCAG AACTTGGAAG 000320 000321 GCCTGCATCA TGATGGCCAA TTCTGCCATA AGCCCTGTCC TCCAGGTGAA AGGAAAGCTA GGGACTGCAC AGTCAATGGG 000400 000401 GATGAACCAG ACTGCGTGCC CTGCCAAGAA GGGAAGGAGT ACACAGACAA AGCCCATTTT TCTTCCAAAT GCAGAAGATG 000480 000481 TAGATTGTGT GATGAAGGAC ATGATGTGAA CATGGAATCA TCAAGGAATG CACACTCACC AGCAACACCA AGTGCAAAGA 000560 000561 GGAAGGTAAT TATTTTTTTA CGGTTATATT CTCCTTTCCC CCAACCCCAT GGAAAGATGT GAAGA |
Predicted Small Protein
Name | NONHSAT015490_smProtein_329:508 |
Length | 60 |
Molecular weight | 6302.4374 |
Aromaticity | 0.0169491525424 |
Instability index | 45.9627118644 |
Isoelectric point | 9.18438720703 |
Runs | 7 |
Runs residual | 0.0258124708443 |
Runs probability | 0.0426981603453 |
Amino acid sequence | MMANSAISPVLQVKGKLGTAQSMGMNQTACPAKKGRSTQTKPIFLPNAEDVDCVMKDMM |
Secondary structure | LLLLLLLLLLLEELLLLLEEELLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHLL |
PRMN | - |
PiMo | - |